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Protein
Submitted name:

Vesicle transport through interaction with t-SNAREs homolog 1B

Gene

VTI1B

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Vesicle transport through interaction with t-SNAREs homolog 1BImported
Gene namesi
Name:VTI1BImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 14

Organism-specific databases

EuPathDBiHostDB:ENSG00000100568.10
HGNCiHGNC:17793 VTI1B

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000100568

PTM / Processingi

Proteomic databases

MaxQBiH0YJJ5
PeptideAtlasiH0YJJ5
PRIDEiH0YJJ5

Expressioni

Gene expression databases

BgeeiENSG00000100568 Expressed in 230 organ(s), highest expression level in C1 segment of cervical spinal cord
ExpressionAtlasiH0YJJ5 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliH0YJJ5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 95T-SNARE coiled-coil homologyInterPro annotationAdd BLAST66

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili63 – 83Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1666 Eukaryota
ENOG4111J90 LUCA
GeneTreeiENSGT00530000063466

Family and domain databases

InterProiView protein in InterPro
IPR000727 T_SNARE_dom
SMARTiView protein in SMART
SM00397 t_SNARE, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All

H0YJJ5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
XTPGGRGDMK YGIYAVENEH MNRLQSQRAM LLQGTESLNR ATQSIERSHR
60 70 80 90 100
IATETDQIGS EIIEELGEQR DQLERTKSRS DNQQAAAFHY HLTGARHPGR
110 120
PGLLQILSQP LNFYREGFVD QNFDLVNA
Length:128
Mass (Da):14,535
Last modified:February 22, 2012 - v1
Checksum:i88BA9348D7D94A97
GO

Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q9UEU0VTI1B_HUMAN
Vesicle transport through interacti...
VTI1B VTI1, VTI1L, VTI1L1, VTI2
232Annotation score:
H0YJL5H0YJL5_HUMAN
Vesicle transport through interacti...
VTI1B
103Annotation score:
G3V5I2G3V5I2_HUMAN
Vesicle transport through interacti...
VTI1B
59Annotation score:
J3KMW2J3KMW2_HUMAN
Vesicle transport through interacti...
VTI1B
44Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL049779 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000554636; ENSP00000451661; ENSG00000100568
UCSCiuc059cqu.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL049779 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliH0YJJ5
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiH0YJJ5
PeptideAtlasiH0YJJ5
PRIDEiH0YJJ5

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000554636; ENSP00000451661; ENSG00000100568
UCSCiuc059cqu.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000100568.10
HGNCiHGNC:17793 VTI1B
OpenTargetsiENSG00000100568
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1666 Eukaryota
ENOG4111J90 LUCA
GeneTreeiENSGT00530000063466

Miscellaneous databases

ChiTaRSiVTI1B human

Gene expression databases

BgeeiENSG00000100568 Expressed in 230 organ(s), highest expression level in C1 segment of cervical spinal cord
ExpressionAtlasiH0YJJ5 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR000727 T_SNARE_dom
SMARTiView protein in SMART
SM00397 t_SNARE, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH0YJJ5_HUMAN
AccessioniPrimary (citable) accession number: H0YJJ5
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 12, 2018
This is version 39 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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