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Protein
Submitted name:

Atlastin-1

Gene

ATL1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Atlastin-1Imported
Gene namesi
Name:ATL1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 14

Organism-specific databases

EuPathDBiHostDB:ENSG00000198513.11
HGNCiHGNC:11231 ATL1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000198513

PTM / Processingi

Proteomic databases

PeptideAtlasiH0YJ65

Expressioni

Gene expression databases

BgeeiENSG00000198513 Expressed in 187 organ(s), highest expression level in middle temporal gyrus
ExpressionAtlasiH0YJ65 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliH0YJ65
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 52GB1/RHD3-type GInterPro annotationAdd BLAST52

Phylogenomic databases

eggNOGiKOG2037 Eukaryota
ENOG410XR6Z LUCA
GeneTreeiENSGT00390000008959

Family and domain databases

InterProiView protein in InterPro
IPR030386 G_GB1_RHD3_dom
IPR015894 Guanylate-bd_N
PfamiView protein in Pfam
PF02263 GBP, 1 hit
PROSITEiView protein in PROSITE
PS51715 G_GB1_RHD3, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 6 potential isoforms that are computationally mapped.Show allAlign All

H0YJ65-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
GNQHEELQNV RKHIHSCFTN ISCFLLPHPG LKVATNPNFD GKLKGLYKDL

SR
Length:52
Mass (Da):5,917
Last modified:February 22, 2012 - v1
Checksum:i2087991E601228A5
GO

Computationally mapped potential isoform sequencesi

There are 6 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q8WXF7ATLA1_HUMAN
Atlastin-1
ATL1 GBP3, SPG3A
558Annotation score:
H0YJA7H0YJA7_HUMAN
Atlastin-1
ATL1
105Annotation score:
G3V5T4G3V5T4_HUMAN
Atlastin-1
ATL1
99Annotation score:
G3V334G3V334_HUMAN
Atlastin-1
ATL1
47Annotation score:
G3V4Y8G3V4Y8_HUMAN
Atlastin-1
ATL1
75Annotation score:
G3V321G3V321_HUMAN
Atlastin-1
ATL1
29Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL118556 Genomic DNA No translation available.
AL606834 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000555266; ENSP00000450897; ENSG00000198513
UCSCiuc059bjw.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL118556 Genomic DNA No translation available.
AL606834 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliH0YJ65
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiH0YJ65

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000555266; ENSP00000450897; ENSG00000198513
UCSCiuc059bjw.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000198513.11
HGNCiHGNC:11231 ATL1
OpenTargetsiENSG00000198513
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG2037 Eukaryota
ENOG410XR6Z LUCA
GeneTreeiENSGT00390000008959

Miscellaneous databases

ChiTaRSiATL1 human

Gene expression databases

BgeeiENSG00000198513 Expressed in 187 organ(s), highest expression level in middle temporal gyrus
ExpressionAtlasiH0YJ65 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR030386 G_GB1_RHD3_dom
IPR015894 Guanylate-bd_N
PfamiView protein in Pfam
PF02263 GBP, 1 hit
PROSITEiView protein in PROSITE
PS51715 G_GB1_RHD3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH0YJ65_HUMAN
AccessioniPrimary (citable) accession number: H0YJ65
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 12, 2018
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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