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Protein
Submitted name:

Neuronal PAS domain-containing protein 3

Gene

NPAS3

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Neuronal PAS domain-containing protein 3Imported
Gene namesi
Name:NPAS3Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 14

Organism-specific databases

EuPathDBiHostDB:ENSG00000151322.18
HGNCiHGNC:19311 NPAS3

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000151322

PTM / Processingi

Proteomic databases

PeptideAtlasiH0YI42
PRIDEiH0YI42

Expressioni

Gene expression databases

BgeeiENSG00000151322 Expressed in 167 organ(s), highest expression level in corpus callosum
ExpressionAtlasiH0YI42 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliH0YI42
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini81 – 132PASInterPro annotationAdd BLAST52

Phylogenomic databases

eggNOGiKOG3558 Eukaryota
ENOG410YK57 LUCA
GeneTreeiENSGT00760000118788

Family and domain databases

CDDicd00130 PAS, 1 hit
InterProiView protein in InterPro
IPR000014 PAS
IPR035965 PAS-like_dom_sf
SUPFAMiSSF55785 SSF55785, 1 hit
PROSITEiView protein in PROSITE
PS50112 PAS, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 6 potential isoforms that are computationally mapped.Show allAlign All

H0YI42-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
XTDNTLERSF FIRMKSTLTK RGVHIKSSGY KVIHITGRLR LRVSLSHGRT
60 70 80 90 100
VPSQIMGLVV VAHALPPPTI NEVRIDCHMF VTRVNMDLNI IYCENRISDY
110 120 130
MDLTPVDIVG KRCYHFIHAE DVEGIRHSHL DS
Length:132
Mass (Da):15,121
Last modified:February 22, 2012 - v1
Checksum:i1EA88F097BAF990C
GO

Computationally mapped potential isoform sequencesi

There are 6 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q8IXF0NPAS3_HUMAN
Neuronal PAS domain-containing prot...
NPAS3 BHLHE12, MOP6, PASD6
933Annotation score:
F8VR32F8VR32_HUMAN
Neuronal PAS domain-containing prot...
NPAS3
938Annotation score:
F8VS42F8VS42_HUMAN
Neuronal PAS domain-containing prot...
NPAS3
906Annotation score:
F8W0C2F8W0C2_HUMAN
Neuronal PAS domain-containing prot...
NPAS3
155Annotation score:
H0YHB6H0YHB6_HUMAN
Neuronal PAS domain-containing prot...
NPAS3
125Annotation score:
H0YHU7H0YHU7_HUMAN
Neuronal PAS domain-containing prot...
NPAS3
13Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL109769 Genomic DNA No translation available.
AL139296 Genomic DNA No translation available.
AL158802 Genomic DNA No translation available.
AL355886 Genomic DNA No translation available.
KC877517 Genomic DNA No translation available.
KC877522 Genomic DNA No translation available.
KF455852 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000552874; ENSP00000448450; ENSG00000151322
UCSCiuc059aqx.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL109769 Genomic DNA No translation available.
AL139296 Genomic DNA No translation available.
AL158802 Genomic DNA No translation available.
AL355886 Genomic DNA No translation available.
KC877517 Genomic DNA No translation available.
KC877522 Genomic DNA No translation available.
KF455852 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliH0YI42
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiH0YI42
PRIDEiH0YI42

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000552874; ENSP00000448450; ENSG00000151322
UCSCiuc059aqx.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000151322.18
HGNCiHGNC:19311 NPAS3
OpenTargetsiENSG00000151322
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG3558 Eukaryota
ENOG410YK57 LUCA
GeneTreeiENSGT00760000118788

Miscellaneous databases

ChiTaRSiNPAS3 human

Gene expression databases

BgeeiENSG00000151322 Expressed in 167 organ(s), highest expression level in corpus callosum
ExpressionAtlasiH0YI42 baseline and differential

Family and domain databases

CDDicd00130 PAS, 1 hit
InterProiView protein in InterPro
IPR000014 PAS
IPR035965 PAS-like_dom_sf
SUPFAMiSSF55785 SSF55785, 1 hit
PROSITEiView protein in PROSITE
PS50112 PAS, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH0YI42_HUMAN
AccessioniPrimary (citable) accession number: H0YI42
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 12, 2018
This is version 37 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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