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Protein
Submitted name:

Liprin-beta-1

Gene

PPFIBP1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Liprin-beta-1Imported
Gene namesi
Name:PPFIBP1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 12

Organism-specific databases

EuPathDBiHostDB:ENSG00000110841.13
HGNCiHGNC:9249 PPFIBP1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000110841

PTM / Processingi

Proteomic databases

MaxQBiH0YGH8
PeptideAtlasiH0YGH8
PRIDEiH0YGH8

Expressioni

Gene expression databases

BgeeiENSG00000110841 Expressed in 234 organ(s), highest expression level in epithelium of mammary gland
ExpressionAtlasiH0YGH8 baseline and differential

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1 – 21Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00760000119138

Family and domain databases

InterProiView protein in InterPro
IPR029515 Liprin
IPR030437 PPFIBP1
PANTHERiPTHR12587 PTHR12587, 1 hit
PTHR12587:SF16 PTHR12587:SF16, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 9 potential isoforms that are computationally mapped.Show allAlign All

H0YGH8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
NEEKDRKIED LRQCLNRYKK MQDTVVLAQG KKGKDGEYEE LLNSSSISSL
60 70 80 90 100
LDAQGFSDLE KSPSPTPVMG SPSCDPFNTS VPEEFHTTIL QVSIPSLLPA
110 120 130 140 150
TVSMETSEKS KLTPKPETSF EENDGNIILG ATVDTQLCDK LLTSSLQKSS
160 170 180 190 200
SLGNLKKETS DGDRAPAESR PFGTLPPRPP GQDTSMDDNP FGTRKVRSSF

GRGFF
Length:205
Mass (Da):22,407
Last modified:February 22, 2012 - v1
Checksum:iF305AAE15E469A15
GO

Computationally mapped potential isoform sequencesi

There are 9 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q86W92LIPB1_HUMAN
Liprin-beta-1
PPFIBP1 KIAA1230
1,011Annotation score:
F5GZP6F5GZP6_HUMAN
Liprin-beta-1
PPFIBP1
744Annotation score:
F5H495F5H495_HUMAN
Liprin-beta-1
PPFIBP1
152Annotation score:
A0A0A0MTP2A0A0A0MTP2_HUMAN
Liprin-beta-1
PPFIBP1
281Annotation score:
H0YFE4H0YFE4_HUMAN
Liprin-beta-1
PPFIBP1
242Annotation score:
F5H6Q7F5H6Q7_HUMAN
Liprin-beta-1
PPFIBP1
86Annotation score:
F5H0E0F5H0E0_HUMAN
Liprin-beta-1
PPFIBP1
109Annotation score:
F5H7K5F5H7K5_HUMAN
Liprin-beta-1
PPFIBP1
18Annotation score:
A0A087WVX8A0A087WVX8_HUMAN
Liprin-beta-1
PPFIBP1
86Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei205Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009509 Genomic DNA No translation available.
AC068794 Genomic DNA No translation available.
AC087257 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000537261; ENSP00000443324; ENSG00000110841
UCSCiuc058mfu.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009509 Genomic DNA No translation available.
AC068794 Genomic DNA No translation available.
AC087257 Genomic DNA No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiH0YGH8
PeptideAtlasiH0YGH8
PRIDEiH0YGH8

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000537261; ENSP00000443324; ENSG00000110841
UCSCiuc058mfu.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000110841.13
HGNCiHGNC:9249 PPFIBP1
OpenTargetsiENSG00000110841
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00760000119138

Miscellaneous databases

ChiTaRSiPPFIBP1 human

Gene expression databases

BgeeiENSG00000110841 Expressed in 234 organ(s), highest expression level in epithelium of mammary gland
ExpressionAtlasiH0YGH8 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR029515 Liprin
IPR030437 PPFIBP1
PANTHERiPTHR12587 PTHR12587, 1 hit
PTHR12587:SF16 PTHR12587:SF16, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH0YGH8_HUMAN
AccessioniPrimary (citable) accession number: H0YGH8
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 12, 2018
This is version 39 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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