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Protein
Submitted name:

Splicing factor, suppressor of white-apricot homolog

Gene

SFSWAP

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Splicing factor, suppressor of white-apricot homologImported
Gene namesi
Name:SFSWAPImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 12

Organism-specific databases

EuPathDBiHostDB:ENSG00000061936.9
HGNCiHGNC:10790 SFSWAP

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000061936

PTM / Processingi

Proteomic databases

MaxQBiH0YFR9
PeptideAtlasiH0YFR9
PRIDEiH0YFR9

Expressioni

Gene expression databases

BgeeiENSG00000061936 Expressed in 238 organ(s), highest expression level in tendon of biceps brachii
ExpressionAtlasiH0YFR9 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliH0YFR9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini99 – 139SURP motifInterPro annotationAdd BLAST41

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili223 – 250Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1847 Eukaryota
ENOG410ZQGI LUCA
GeneTreeiENSGT00730000111096

Family and domain databases

Gene3Di1.10.10.790, 1 hit
InterProiView protein in InterPro
IPR000061 Surp
IPR035967 SWAP/Surp_sf
PfamiView protein in Pfam
PF01805 Surp, 1 hit
SMARTiView protein in SMART
SM00648 SWAP, 1 hit
SUPFAMiSSF109905 SSF109905, 1 hit
PROSITEiView protein in PROSITE
PS50128 SURP, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

H0YFR9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
XTVAAMYYSY YMLPDGTYCL APPPPGIDVT TYYSTLPAGV TVSNSPGVTT
60 70 80 90 100
TAPPPPGTTP LPPPTTAETS SGATSTTTTT SALAPVAAII PPPPDVQPVI
110 120 130 140 150
DKLAEYVARN GLKFETSVRA KNDQRFEFLQ PWHQYNAYYE FKKQFFLQKE
160 170 180 190 200
GGDSMQAVSA PEEAPTDSAP EKPSDAGEDG APEDAAEVGA RAGSGGKKEA
210 220 230 240 250
SSSKTVPDGK LVKAKQKLED RLAAAAREKL AQASKESKEK QLQAERKRKA
260 270 280 290 300
ALFLQTLKNP LPEAEAGKIE ESPFSVEESS TTPCPLLTGG RPLPTLEVKP
310 320
PDRPSSKSKD PPREEEKEKK
Length:320
Mass (Da):34,202
Last modified:February 22, 2012 - v1
Checksum:i7A222F51AD652A6D
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q12872SFSWA_HUMAN
Splicing factor, suppressor of whit...
SFSWAP SFRS8, SWAP
951Annotation score:
F5H1A5F5H1A5_HUMAN
Splicing factor, suppressor of whit...
SFSWAP
121Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei320Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC117500 Genomic DNA No translation available.
AC131009 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000537164; ENSP00000439957; ENSG00000061936
UCSCiuc058vgn.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC117500 Genomic DNA No translation available.
AC131009 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliH0YFR9
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiH0YFR9
PeptideAtlasiH0YFR9
PRIDEiH0YFR9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000537164; ENSP00000439957; ENSG00000061936
UCSCiuc058vgn.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000061936.9
HGNCiHGNC:10790 SFSWAP
OpenTargetsiENSG00000061936
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1847 Eukaryota
ENOG410ZQGI LUCA
GeneTreeiENSGT00730000111096

Miscellaneous databases

ChiTaRSiSFSWAP human

Gene expression databases

BgeeiENSG00000061936 Expressed in 238 organ(s), highest expression level in tendon of biceps brachii
ExpressionAtlasiH0YFR9 baseline and differential

Family and domain databases

Gene3Di1.10.10.790, 1 hit
InterProiView protein in InterPro
IPR000061 Surp
IPR035967 SWAP/Surp_sf
PfamiView protein in Pfam
PF01805 Surp, 1 hit
SMARTiView protein in SMART
SM00648 SWAP, 1 hit
SUPFAMiSSF109905 SSF109905, 1 hit
PROSITEiView protein in PROSITE
PS50128 SURP, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH0YFR9_HUMAN
AccessioniPrimary (citable) accession number: H0YFR9
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 12, 2018
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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