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Protein
Submitted name:

Polyamine-modulated factor 1-binding protein 1

Gene

PMFBP1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Polyamine-modulated factor 1-binding protein 1Imported
Gene namesi
Name:PMFBP1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 16

Organism-specific databases

EuPathDBiHostDB:ENSG00000118557.15
HGNCiHGNC:17728 PMFBP1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000118557

PTM / Processingi

Proteomic databases

PeptideAtlasiH0YFP6
PRIDEiH0YFP6

Expressioni

Gene expression databases

BgeeiENSG00000118557 Expressed in 93 organ(s), highest expression level in sperm
ExpressionAtlasiH0YFP6 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliH0YFP6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili125 – 166Sequence analysisAdd BLAST42
Coiled coili171 – 191Sequence analysisAdd BLAST21
Coiled coili202 – 295Sequence analysisAdd BLAST94
Coiled coili317 – 344Sequence analysisAdd BLAST28
Coiled coili349 – 386Sequence analysisAdd BLAST38
Coiled coili409 – 499Sequence analysisAdd BLAST91

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IV92 Eukaryota
ENOG4112C9M LUCA
GeneTreeiENSGT00390000012700

Family and domain databases

InterProiView protein in InterPro
IPR037391 PMF1-bd
PANTHERiPTHR18881 PTHR18881, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 7 potential isoforms that are computationally mapped.Show allAlign All

H0YFP6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
QVKMLQGELG GIMGQEPENK GDHSKVRIYT SPCMIQEHQE TQKRLSEVWQ
60 70 80 90 100
KVSQQDDLIQ ELRNKLACSN ALVLEREKAL IKLQADFASC TATHRYPPSS
110 120 130 140 150
SEECEDIKKI LKHLQEQKDS QCLHVEEYQN LVKDLRVELE AVSEQKRNIM
160 170 180 190 200
KDMMKLELDL HGLREETSAH IERKDKDITI LQCRLQELQL EFTETQKLTL
210 220 230 240 250
KKDKFLQEKD EMLQELEKKL TQVQNSLLKK EKELEKQQCM ATELEMTVKE
260 270 280 290 300
AKQDKSKEAE CKALQAEVQK LKNSLEEAKQ QERLAAQQAA QCKEEAALAG
310 320 330 340 350
CHLEDTQRKL QKGLLLDKQK ADTIQELQRE LQMLQKESSM AEKEQTSNRK
360 370 380 390 400
RVEELSLELS EALRKLENSD KEKRQLQKTV AEQDMKMNDM LDRIKHQHRE
410 420 430 440 450
QGSIKCKLEE DLQEATKLLE DKREQLKKSK EHEKLMEGEL EALRQEFKKK
460 470 480 490 500
DKTLKENSRK LEEENENLRA ELQCCSTQLE SSLNKYNTSQ QVIQDLNKEK

CS
Length:502
Mass (Da):58,726
Last modified:February 22, 2012 - v1
Checksum:i786DC9F741F79922
GO

Computationally mapped potential isoform sequencesi

There are 7 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q8TBY8PMFBP_HUMAN
Polyamine-modulated factor 1-bindin...
PMFBP1
1,022Annotation score:
F5H5J2F5H5J2_HUMAN
Polyamine-modulated factor 1-bindin...
PMFBP1
116Annotation score:
F5H4F8F5H4F8_HUMAN
Polyamine-modulated factor 1-bindin...
PMFBP1
156Annotation score:
F5GXW3F5GXW3_HUMAN
Polyamine-modulated factor 1-bindin...
PMFBP1
110Annotation score:
F8W771F8W771_HUMAN
Polyamine-modulated factor 1-bindin...
PMFBP1
101Annotation score:
F5GYR2F5GYR2_HUMAN
Polyamine-modulated factor 1-bindin...
PMFBP1
47Annotation score:
F5H0H9F5H0H9_HUMAN
Polyamine-modulated factor 1-bindin...
PMFBP1
68Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004682 Genomic DNA No translation available.
AC009087 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000537392; ENSP00000439564; ENSG00000118557
UCSCiuc059wzi.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004682 Genomic DNA No translation available.
AC009087 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliH0YFP6
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiH0YFP6
PRIDEiH0YFP6

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000537392; ENSP00000439564; ENSG00000118557
UCSCiuc059wzi.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000118557.15
HGNCiHGNC:17728 PMFBP1
OpenTargetsiENSG00000118557
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IV92 Eukaryota
ENOG4112C9M LUCA
GeneTreeiENSGT00390000012700

Gene expression databases

BgeeiENSG00000118557 Expressed in 93 organ(s), highest expression level in sperm
ExpressionAtlasiH0YFP6 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR037391 PMF1-bd
PANTHERiPTHR18881 PTHR18881, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH0YFP6_HUMAN
AccessioniPrimary (citable) accession number: H0YFP6
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 12, 2018
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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