UniProtKB - H0YFE4 (H0YFE4_HUMAN)
Protein
Submitted name:
Liprin-beta-1
Gene
PPFIBP1
Organism
Homo sapiens (Human)
Status
Names & Taxonomyi
Protein namesi | Submitted name: Liprin-beta-1Imported |
Gene namesi | Name:PPFIBP1Imported |
Organismi | Homo sapiens (Human)Imported |
Taxonomic identifieri | 9606 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Proteomesi |
|
Organism-specific databases
HGNCi | HGNC:9249, PPFIBP1 |
VEuPathDBi | HostDB:ENSG00000110841.13 |
PTM / Processingi
Proteomic databases
MaxQBi | H0YFE4 |
PeptideAtlasi | H0YFE4 |
PRIDEi | H0YFE4 |
ProteomicsDBi | 38044 |
Expressioni
Gene expression databases
Bgeei | ENSG00000110841, Expressed in epithelium of mammary gland and 243 other tissues |
ExpressionAtlasi | H0YFE4, baseline and differential |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 35 – 107 | SAMInterPro annotationAdd BLAST | 73 |
Keywords - Domaini
Coiled coilARBA annotation, RepeatARBA annotationPhylogenomic databases
GeneTreei | ENSGT00990000203651 |
HOGENOMi | CLU_011689_1_0_1 |
Family and domain databases
CDDi | cd09569, SAM_liprin-beta1_2_repeat3, 1 hit |
Gene3Di | 1.10.150.50, 2 hits |
InterProi | View protein in InterPro IPR029515, Liprin IPR037619, Liprin-beta_SAM_rpt_3 IPR030437, PPFIBP1 IPR001660, SAM IPR013761, SAM/pointed_sf |
PANTHERi | PTHR12587, PTHR12587, 2 hits PTHR12587:SF16, PTHR12587:SF16, 2 hits |
Pfami | View protein in Pfam PF07647, SAM_2, 1 hit |
SMARTi | View protein in SMART SM00454, SAM, 1 hit |
SUPFAMi | SSF47769, SSF47769, 1 hit |
(1+)i Sequence
Sequence statusi: Fragment.
This entry has 1 described isoform and 9 potential isoforms that are computationally mapped.Show allAlign All
H0YFE4-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
XDIGLPQYKT QFDEGRVDGR MLHYMTVNTI APSEVQKWTN HRVMEWLRSV
60 70 80 90 100
DLAEYAPNLR GSGVHGGLMV LEPRFNVETM AQLLNIPPNK TLLRRHLATH
110 120 130 140 150
FNLLIGAEAQ HQKRDAMELP DYVLLTATAK VKPKKLAFSN FGNLRKKKQE
160 170 180 190 200
DGEEYVCPME LGQASGSASK KGFKPGLDMR LYEEDDLDRL EQMEDSEGTV
210 220 230 240
RQIGAFSEGI NNLTHMLKED DMFKDFAARS PSASITDEDS NV
Computationally mapped potential isoform sequencesi
There are 9 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketQ86W92 | LIPB1_HUMAN | Liprin-beta-1 | PPFIBP1 KIAA1230 | 1,011 | Annotation score: | ||
F5GZP6 | F5GZP6_HUMAN | Liprin-beta-1 | PPFIBP1 | 744 | Annotation score: | ||
H0YGH8 | H0YGH8_HUMAN | Liprin-beta-1 | PPFIBP1 | 205 | Annotation score: | ||
F5H495 | F5H495_HUMAN | Liprin-beta-1 | PPFIBP1 | 152 | Annotation score: | ||
A0A0A0MTP2 | A0A0A0MTP2_HUMAN | Liprin-beta-1 | PPFIBP1 | 281 | Annotation score: | ||
A0A087WVX8 | A0A087WVX8_HUMAN | Liprin-beta-1 | PPFIBP1 | 86 | Annotation score: | ||
F5H0E0 | F5H0E0_HUMAN | Liprin-beta-1 | PPFIBP1 | 109 | Annotation score: | ||
F5H6Q7 | F5H6Q7_HUMAN | Liprin-beta-1 | PPFIBP1 | 86 | Annotation score: | ||
F5H7K5 | F5H7K5_HUMAN | Liprin-beta-1 | PPFIBP1 | 18 | Annotation score: |
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Non-terminal residuei | 1 | Imported | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC009509 Genomic DNA No translation available. AC068794 Genomic DNA No translation available. AC087257 Genomic DNA No translation available. |
Genome annotation databases
Ensembli | ENST00000539326; ENSP00000438174; ENSG00000110841 |
UCSCi | uc058mfx.1, human |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC009509 Genomic DNA No translation available. AC068794 Genomic DNA No translation available. AC087257 Genomic DNA No translation available. |
3D structure databases
ModBasei | Search... |
Proteomic databases
MaxQBi | H0YFE4 |
PeptideAtlasi | H0YFE4 |
PRIDEi | H0YFE4 |
ProteomicsDBi | 38044 |
Protocols and materials databases
Antibodypediai | 1098, 155 antibodies |
Genome annotation databases
Ensembli | ENST00000539326; ENSP00000438174; ENSG00000110841 |
UCSCi | uc058mfx.1, human |
Organism-specific databases
HGNCi | HGNC:9249, PPFIBP1 |
OpenTargetsi | ENSG00000110841 |
VEuPathDBi | HostDB:ENSG00000110841.13 |
GenAtlasi | Search... |
Phylogenomic databases
GeneTreei | ENSGT00990000203651 |
HOGENOMi | CLU_011689_1_0_1 |
Miscellaneous databases
ChiTaRSi | PPFIBP1, human |
Gene expression databases
Bgeei | ENSG00000110841, Expressed in epithelium of mammary gland and 243 other tissues |
ExpressionAtlasi | H0YFE4, baseline and differential |
Family and domain databases
CDDi | cd09569, SAM_liprin-beta1_2_repeat3, 1 hit |
Gene3Di | 1.10.150.50, 2 hits |
InterProi | View protein in InterPro IPR029515, Liprin IPR037619, Liprin-beta_SAM_rpt_3 IPR030437, PPFIBP1 IPR001660, SAM IPR013761, SAM/pointed_sf |
PANTHERi | PTHR12587, PTHR12587, 2 hits PTHR12587:SF16, PTHR12587:SF16, 2 hits |
Pfami | View protein in Pfam PF07647, SAM_2, 1 hit |
SMARTi | View protein in SMART SM00454, SAM, 1 hit |
SUPFAMi | SSF47769, SSF47769, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | H0YFE4_HUMAN | |
Accessioni | H0YFE4Primary (citable) accession number: H0YFE4 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | February 22, 2012 |
Last sequence update: | February 22, 2012 | |
Last modified: | February 10, 2021 | |
This is version 62 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) | |
Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. |