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Protein
Submitted name:

Liprin-alpha-1

Gene

PPFIA1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Liprin-alpha-1Imported
Gene namesi
Name:PPFIA1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 11

Organism-specific databases

EuPathDBiHostDB:ENSG00000131626.15
HGNCiHGNC:9245 PPFIA1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000131626

PTM / Processingi

Proteomic databases

MaxQBiH0YD72
PeptideAtlasiH0YD72
PRIDEiH0YD72

Expressioni

Gene expression databases

BgeeiENSG00000131626 Expressed in 229 organ(s), highest expression level in oocyte
ExpressionAtlasiH0YD72 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliH0YD72
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili21 – 69Sequence analysisAdd BLAST49

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0249 Eukaryota
ENOG410XP8Z LUCA
GeneTreeiENSGT00760000119138

Family and domain databases

InterProiView protein in InterPro
IPR029515 Liprin
IPR030438 PPFIA1
PANTHERiPTHR12587 PTHR12587, 2 hits
PTHR12587:SF15 PTHR12587:SF15, 2 hits

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 12 potential isoforms that are computationally mapped.Show allAlign All

H0YD72-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
XTVDKLLSES NERLQLHLKE RMAALEDKNS LLREVESAKK QLEETQHDKD
60 70 80 90 100
QLVLNIEALR AELDHMRLRG ASLHHGRPHL GSVPDFRFPM ADGHTDSYST
110 120 130 140 150
SAVLRRPQKG RLAALRDEPS KVRDDKTTIK CETSPPSSPR ALRLDRLHKG
160 170 180 190 200
ALHTVSHEDI RDIRNSTGSQ DGPVSNPSSS NSSQDSLHKA PKKKGIKSSI
210 220 230
GRLFGKKEKG RPGQTGKEAL GQAGVSETDN SSQDALG
Length:237
Mass (Da):26,093
Last modified:February 22, 2012 - v1
Checksum:i89B53CF981A11B7F
GO

Computationally mapped potential isoform sequencesi

There are 12 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q13136LIPA1_HUMAN
Liprin-alpha-1
PPFIA1 LIP1
1,202Annotation score:
H0YDZ8H0YDZ8_HUMAN
Liprin-alpha-1
PPFIA1
98Annotation score:
H0YDW2H0YDW2_HUMAN
Liprin-alpha-1
PPFIA1
389Annotation score:
E9PJZ7E9PJZ7_HUMAN
Liprin-alpha-1
PPFIA1
583Annotation score:
E9PPF6E9PPF6_HUMAN
Liprin-alpha-1
PPFIA1
158Annotation score:
E9PID5E9PID5_HUMAN
Liprin-alpha-1
PPFIA1
99Annotation score:
H0YEF9H0YEF9_HUMAN
Liprin-alpha-1
PPFIA1
387Annotation score:
H0YF15H0YF15_HUMAN
Liprin-alpha-1
PPFIA1
97Annotation score:
A0A1B0GVT3A0A1B0GVT3_HUMAN
Liprin-alpha-1
PPFIA1
271Annotation score:
A0A2R8Y7R9A0A2R8Y7R9_HUMAN
Liprin-alpha-1
PPFIA1
1,224Annotation score:
There are more potential isoformsShow all

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei237Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP000487 Genomic DNA No translation available.
AP002336 Genomic DNA No translation available.
KC877433 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000530798; ENSP00000433114; ENSG00000131626
UCSCiuc058esh.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP000487 Genomic DNA No translation available.
AP002336 Genomic DNA No translation available.
KC877433 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliH0YD72
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiH0YD72
PeptideAtlasiH0YD72
PRIDEiH0YD72

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000530798; ENSP00000433114; ENSG00000131626
UCSCiuc058esh.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000131626.15
HGNCiHGNC:9245 PPFIA1
OpenTargetsiENSG00000131626
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG0249 Eukaryota
ENOG410XP8Z LUCA
GeneTreeiENSGT00760000119138

Miscellaneous databases

ChiTaRSiPPFIA1 human

Gene expression databases

BgeeiENSG00000131626 Expressed in 229 organ(s), highest expression level in oocyte
ExpressionAtlasiH0YD72 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR029515 Liprin
IPR030438 PPFIA1
PANTHERiPTHR12587 PTHR12587, 2 hits
PTHR12587:SF15 PTHR12587:SF15, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiH0YD72_HUMAN
AccessioniPrimary (citable) accession number: H0YD72
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 12, 2018
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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