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Protein
Submitted name:

Coiled-coil domain-containing protein 18

Gene

CCDC18

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Coiled-coil domain-containing protein 18Imported
Gene namesi
Name:CCDC18Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 1

Organism-specific databases

EuPathDBiHostDB:ENSG00000122483.17
HGNCiHGNC:30370 CCDC18

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000122483

PTM / Processingi

Proteomic databases

MaxQBiH0YCD6
PeptideAtlasiH0YCD6
PRIDEiH0YCD6

Expressioni

Gene expression databases

BgeeiENSG00000122483 Expressed in 121 organ(s), highest expression level in testis
ExpressionAtlasiH0YCD6 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliH0YCD6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili152 – 172Sequence analysisAdd BLAST21
Coiled coili214 – 255Sequence analysisAdd BLAST42
Coiled coili284 – 364Sequence analysisAdd BLAST81
Coiled coili403 – 437Sequence analysisAdd BLAST35

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IJJN Eukaryota
ENOG4111YKF LUCA
GeneTreeiENSGT00710000106794

Family and domain databases

InterProiView protein in InterPro
IPR029613 Ccdc18/Sojo
PANTHERiPTHR18875:SF8 PTHR18875:SF8, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 6 potential isoforms that are computationally mapped.Show allAlign All

H0YCD6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
XPRLPRAGAR ERVRGFLTQT RVRSAQSPGG SLPSDDLGEM ESSSSDYYNK
60 70 80 90 100
DNEEESLLAN VASLRHELKI TEWSLQSLGE ELSSVSPSEN SDYAPNPSRS
110 120 130 140 150
EKLILDVQPS HPGLLNYSPY ENVCKISGSS TDFQKKPRDK MFSSSAPVDQ
160 170 180 190 200
EIKSLREKLN KLRQQNACLV TQNHSLMTKF ESIHFELTQS RAKVSMLESA
210 220 230 240 250
QQQAASVPIL EEQIINLEAE VSAQDKVLRE AENKLEQSQK MVIEKEQSLQ
260 270 280 290 300
ESKEECIKLK VDLLEQTKQG KRAERQRNEA LYNAEELSKA FQQYKKKVAE
310 320 330 340 350
KLEKVQAEEE ILERNLTNCE KENKRLQERC GLYKSELEIL KEKLRQLKEE
360 370 380 390 400
NNNGKEKLRI MAVKNSEVMA QLTESRQSIL KLESELENKD EILRDKFSLM
410 420 430 440
NENRELKVRV AAQNERLDLC QQEIESSRVE LRSLEKIISQ LPN
Length:443
Mass (Da):50,865
Last modified:February 22, 2012 - v1
Checksum:i781A13C13B491CF9
GO

Computationally mapped potential isoform sequencesi

There are 6 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q5T9S5CCD18_HUMAN
Coiled-coil domain-containing prote...
CCDC18
1,454Annotation score:
E9PFB9E9PFB9_HUMAN
Coiled-coil domain-containing prote...
CCDC18
1,299Annotation score:
J3KP97J3KP97_HUMAN
Coiled-coil domain-containing prote...
CCDC18
1,508Annotation score:
Q5T9S2Q5T9S2_HUMAN
Coiled-coil domain-containing prote...
CCDC18
720Annotation score:
H7C0C9H7C0C9_HUMAN
Coiled-coil domain-containing prote...
CCDC18
166Annotation score:
H0YDP2H0YDP2_HUMAN
Coiled-coil domain-containing prote...
CCDC18
95Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC126124 Genomic DNA No translation available.
AL139421 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000481180; ENSP00000431409; ENSG00000122483
UCSCiuc057ijc.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC126124 Genomic DNA No translation available.
AL139421 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliH0YCD6
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiH0YCD6
PeptideAtlasiH0YCD6
PRIDEiH0YCD6

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000481180; ENSP00000431409; ENSG00000122483
UCSCiuc057ijc.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000122483.17
HGNCiHGNC:30370 CCDC18
OpenTargetsiENSG00000122483
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IJJN Eukaryota
ENOG4111YKF LUCA
GeneTreeiENSGT00710000106794

Miscellaneous databases

ChiTaRSiCCDC18 human

Gene expression databases

BgeeiENSG00000122483 Expressed in 121 organ(s), highest expression level in testis
ExpressionAtlasiH0YCD6 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR029613 Ccdc18/Sojo
PANTHERiPTHR18875:SF8 PTHR18875:SF8, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH0YCD6_HUMAN
AccessioniPrimary (citable) accession number: H0YCD6
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 12, 2018
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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