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Protein
Submitted name:

Beta-sarcoglycan

Gene

SGCB

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Beta-sarcoglycanImported
Gene namesi
Name:SGCBImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 4

Organism-specific databases

EuPathDBiHostDB:ENSG00000163069.12
HGNCiHGNC:10806 SGCB

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei58 – 78HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000163069

PTM / Processingi

Proteomic databases

MaxQBiH0Y8J3
PeptideAtlasiH0Y8J3
PRIDEiH0Y8J3

Expressioni

Gene expression databases

BgeeiENSG00000163069 Expressed in 231 organ(s), highest expression level in tendon of biceps brachii
ExpressionAtlasiH0Y8J3 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliH0Y8J3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IEAC Eukaryota
ENOG4111F15 LUCA
GeneTreeiENSGT00390000008110

Family and domain databases

InterProiView protein in InterPro
IPR027659 Sgcb
PANTHERiPTHR21142 PTHR21142, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

H0Y8J3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
XAAAAEQQSS NGPVKKSMRE KAVERRSVNK EHNSNFKAGY IPIDEDRLHK
60 70 80 90 100
TGLRGRKGNL AICVIILLFI LAVINLILPG SQARDRRAFS GIPDAYRKKI
Length:100
Mass (Da):11,109
Last modified:February 22, 2012 - v1
Checksum:iE6E57AF8F55B9ADC
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q16585SGCB_HUMAN
Beta-sarcoglycan
SGCB
318Annotation score:
H0YA15H0YA15_HUMAN
Beta-sarcoglycan
SGCB
93Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC093858 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000506357; ENSP00000421235; ENSG00000163069
UCSCiuc062wod.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC093858 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliH0Y8J3
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiH0Y8J3
PeptideAtlasiH0Y8J3
PRIDEiH0Y8J3

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000506357; ENSP00000421235; ENSG00000163069
UCSCiuc062wod.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000163069.12
HGNCiHGNC:10806 SGCB
OpenTargetsiENSG00000163069
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IEAC Eukaryota
ENOG4111F15 LUCA
GeneTreeiENSGT00390000008110

Miscellaneous databases

ChiTaRSiSGCB human

Gene expression databases

BgeeiENSG00000163069 Expressed in 231 organ(s), highest expression level in tendon of biceps brachii
ExpressionAtlasiH0Y8J3 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR027659 Sgcb
PANTHERiPTHR21142 PTHR21142, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH0Y8J3_HUMAN
AccessioniPrimary (citable) accession number: H0Y8J3
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 12, 2018
This is version 37 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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