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Protein
Submitted name:

Endoplasmic reticulum-Golgi intermediate compartment protein 3

Gene

ERGIC3

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Endoplasmic reticulum-Golgi intermediate compartment protein 3Imported
Gene namesi
Name:ERGIC3Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 20

Organism-specific databases

EuPathDBiHostDB:ENSG00000125991.18
HGNCiHGNC:15927 ERGIC3

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei88 – 113HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000125991

PTM / Processingi

Proteomic databases

MaxQBiH0Y802
PeptideAtlasiH0Y802
PRIDEiH0Y802

Expressioni

Gene expression databases

BgeeiENSG00000125991 Expressed in 233 organ(s), highest expression level in testis
ExpressionAtlasiH0Y802 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliH0Y802
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 110COPIIcoated_ERVInterPro annotationAdd BLAST109

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2667 Eukaryota
ENOG410XP7X LUCA
GeneTreeiENSGT00530000063113

Family and domain databases

InterProiView protein in InterPro
IPR012936 Erv_C
PfamiView protein in Pfam
PF07970 COPIIcoated_ERV, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 7 potential isoforms that are computationally mapped.Show allAlign All

H0Y802-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
XPLDHTNVTA PQASMMFQYF VKVVPTVYMK VDGEAPLPPQ VLRTNQFSVT
60 70 80 90 100
RHEKVANGLL GDQGLPGVFV LYELSPMMVK LTEKHRSFTH FLTGVCAIIG
110 120 130
GMFTVAGLID SLIYHSARAI QKKIDLGKTT
Length:130
Mass (Da):14,330
Last modified:February 22, 2012 - v1
Checksum:iCC5C29E6E54479B1
GO

Computationally mapped potential isoform sequencesi

There are 7 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q9Y282ERGI3_HUMAN
Endoplasmic reticulum-Golgi interme...
ERGIC3 C20orf47, ERV46, SDBCAG84, CGI-54, PRO0989
383Annotation score:
H0Y5K5H0Y5K5_HUMAN
Endoplasmic reticulum-Golgi interme...
ERGIC3
397Annotation score:
A6PVJ2A6PVJ2_HUMAN
ERGIC and golgi 3
ERGIC3 RP3-477O4.12-011
118Annotation score:
H0Y621H0Y621_HUMAN
Endoplasmic reticulum-Golgi interme...
ERGIC3
326Annotation score:
H0Y6Z0H0Y6Z0_HUMAN
Endoplasmic reticulum-Golgi interme...
ERGIC3
157Annotation score:
A0A0C4DH46A0A0C4DH46_HUMAN
Endoplasmic reticulum-Golgi interme...
ERGIC3
123Annotation score:
A0A1W2PPS8A0A1W2PPS8_HUMAN
Endoplasmic reticulum-Golgi interme...
ERGIC3
198Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO393401 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000451605; ENSP00000416402; ENSG00000125991
UCSCiuc061wnp.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO393401 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliH0Y802
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiH0Y802
PeptideAtlasiH0Y802
PRIDEiH0Y802

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000451605; ENSP00000416402; ENSG00000125991
UCSCiuc061wnp.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000125991.18
HGNCiHGNC:15927 ERGIC3
OpenTargetsiENSG00000125991
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG2667 Eukaryota
ENOG410XP7X LUCA
GeneTreeiENSGT00530000063113

Miscellaneous databases

ChiTaRSiERGIC3 human

Gene expression databases

BgeeiENSG00000125991 Expressed in 233 organ(s), highest expression level in testis
ExpressionAtlasiH0Y802 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR012936 Erv_C
PfamiView protein in Pfam
PF07970 COPIIcoated_ERV, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH0Y802_HUMAN
AccessioniPrimary (citable) accession number: H0Y802
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 12, 2018
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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