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Protein
Submitted name:

Transcription factor RFX3

Gene

RFX3

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Transcription factor RFX3Imported
Gene namesi
Name:RFX3Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 9

Organism-specific databases

EuPathDBiHostDB:ENSG00000080298.15
HGNCiHGNC:9984 RFX3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000080298

Expressioni

Gene expression databases

BgeeiENSG00000080298 Expressed in 192 organ(s), highest expression level in oviduct epithelium
ExpressionAtlasiH0Y790 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliH0Y790
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 95RFX1_trans_actInterPro annotationAdd BLAST94

Phylogenomic databases

eggNOGiKOG3712 Eukaryota
ENOG410XSHE LUCA
GeneTreeiENSGT00550000074532

Family and domain databases

InterProiView protein in InterPro
IPR039779 RFX-like
IPR007668 RFX1_trans_act
PANTHERiPTHR12619 PTHR12619, 1 hit
PfamiView protein in Pfam
PF04589 RFX1_trans_act, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 8 potential isoforms that are computationally mapped.Show allAlign All

H0Y790-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
VQQVQTVQQV QHVYPAQVQY VEGSDTVYTN GAIRTTTYPY TETQMYSQNT
60 70 80 90 100
GGNYFDTQGS SAQVTTVVSS HSMVGTGGIQ MGVTGGQLIS SSGGTYLIGN
110 120 130
SMENSGHSVT HTTRASPATL FLFSCVPFSL GQLSP
Length:135
Mass (Da):14,285
Last modified:February 22, 2012 - v1
Checksum:iAB7918E2C0CDC825
GO

Computationally mapped potential isoform sequencesi

There are 8 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
P48380RFX3_HUMAN
Transcription factor RFX3
RFX3
749Annotation score:
F6UGA0F6UGA0_HUMAN
Transcription factor RFX3
RFX3
216Annotation score:
F6UV76F6UV76_HUMAN
Transcription factor RFX3
RFX3
184Annotation score:
A9Z1Z2A9Z1Z2_HUMAN
Transcription factor RFX3
RFX3
85Annotation score:
F6XM74F6XM74_HUMAN
Transcription factor RFX3
RFX3
138Annotation score:
H0Y7Z4H0Y7Z4_HUMAN
Transcription factor RFX3
RFX3
156Annotation score:
F6USP3F6USP3_HUMAN
Transcription factor RFX3
RFX3
174Annotation score:
H0Y7W5H0Y7W5_HUMAN
Transcription factor RFX3
RFX3
124Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL133549 Genomic DNA No translation available.
AL354941 Genomic DNA No translation available.
AL365202 Genomic DNA No translation available.
AL603631 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000442560; ENSP00000410988; ENSG00000080298
UCSCiuc064rxf.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL133549 Genomic DNA No translation available.
AL354941 Genomic DNA No translation available.
AL365202 Genomic DNA No translation available.
AL603631 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliH0Y790
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000442560; ENSP00000410988; ENSG00000080298
UCSCiuc064rxf.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000080298.15
HGNCiHGNC:9984 RFX3
OpenTargetsiENSG00000080298
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG3712 Eukaryota
ENOG410XSHE LUCA
GeneTreeiENSGT00550000074532

Miscellaneous databases

ChiTaRSiRFX3 human

Gene expression databases

BgeeiENSG00000080298 Expressed in 192 organ(s), highest expression level in oviduct epithelium
ExpressionAtlasiH0Y790 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR039779 RFX-like
IPR007668 RFX1_trans_act
PANTHERiPTHR12619 PTHR12619, 1 hit
PfamiView protein in Pfam
PF04589 RFX1_trans_act, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH0Y790_HUMAN
AccessioniPrimary (citable) accession number: H0Y790
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: November 7, 2018
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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