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Protein
Submitted name:

CDK5 regulatory subunit-associated protein 1

Gene

CDK5RAP1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
CDK5 regulatory subunit-associated protein 1Imported
Gene namesi
Name:CDK5RAP1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 20

Organism-specific databases

EuPathDBiHostDB:ENSG00000101391.20
HGNCiHGNC:15880 CDK5RAP1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000101391

PTM / Processingi

Proteomic databases

MaxQBiH0Y721
PeptideAtlasiH0Y721
PRIDEiH0Y721

Expressioni

Gene expression databases

BgeeiENSG00000101391 Expressed in 226 organ(s), highest expression level in small intestine Peyer's patch
ExpressionAtlasiH0Y721 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliH0Y721
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 39MTTase N-terminalInterPro annotationAdd BLAST39
Domaini170 – 245TRAMInterPro annotationAdd BLAST76

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili151 – 171Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2492 Eukaryota
COG0621 LUCA
GeneTreeiENSGT00530000063447

Family and domain databases

Gene3Di3.80.30.20, 1 hit
InterProiView protein in InterPro
IPR013848 Methylthiotransferase_N
IPR023404 rSAM_horseshoe
IPR002792 TRAM_dom
PfamiView protein in Pfam
PF01938 TRAM, 1 hit
PROSITEiView protein in PROSITE
PS51449 MTTASE_N, 1 hit
PS50926 TRAM, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.iShow all

H0Y721-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
XCMAERLKEE ILNREKMVDI LAGPDAYRDL PRLLAVAESG QQAANVLLSL
60 70 80 90 100
DETYADVMPV QTSASATSAF VYSREAYVEL VHHIRESIPG VSLSSDFIAG
110 120 130 140 150
FCGETEEDHV QTVSLLREVQ YNMGFLFAYS MRQKTRAYHR LKDDVPEEVK
160 170 180 190 200
LRRLEELITI FREEATKANQ TSVGCTQLVL VEGLSKRSAT DLCGRNDGNL
210 220 230 240 250
KVIFPDAEME DVNNPGLRVR AQPGDYVLVK ITSASSQTLR GHVLCRTTLR

DSSAYC
Length:256
Mass (Da):28,566
Last modified:February 22, 2012 - v1
Checksum:iEFF1B42F2E5CFC47
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q96SZ6CK5P1_HUMAN
CDK5 regulatory subunit-associated ...
CDK5RAP1 C20orf34, CGI-05, HSPC167
601Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL355392 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000427097; ENSP00000409474; ENSG00000101391
UCSCiuc061wga.1 human

Similar proteinsi

Entry informationi

Entry nameiH0Y721_HUMAN
AccessioniPrimary (citable) accession number: H0Y721
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 12, 2018
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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