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Protein
Submitted name:

U3 small nucleolar ribonucleoprotein protein IMP4

Gene

IMP4

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
U3 small nucleolar ribonucleoprotein protein IMP4Imported
Gene namesi
Name:IMP4Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 2

Organism-specific databases

EuPathDBiHostDB:ENSG00000136718.9
HGNCiHGNC:30856 IMP4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000136718

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_500354604821 – 280Sequence analysisAdd BLAST260

Proteomic databases

EPDiH0Y714
MaxQBiH0Y714
PeptideAtlasiH0Y714
PRIDEiH0Y714

Expressioni

Gene expression databases

BgeeiENSG00000136718 Expressed in 222 organ(s), highest expression level in body of pancreas
ExpressionAtlasiH0Y714 baseline and differential

Interactioni

Protein-protein interaction databases

IntActiH0Y714, 7 interactors

Structurei

3D structure databases

ProteinModelPortaliH0Y714
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini72 – 253BrixInterPro annotationAdd BLAST182

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG2781 Eukaryota
COG2136 LUCA
GeneTreeiENSGT00550000074987

Family and domain databases

InterProiView protein in InterPro
IPR007109 Brix
PfamiView protein in Pfam
PF04427 Brix, 1 hit
SMARTiView protein in SMART
SM00879 Brix, 1 hit
PROSITEiView protein in PROSITE
PS50833 BRIX, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

H0Y714-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
XSKCLPAVFL AHWVLLLVLR VFLPCDENRL IPTELRREAL ALQGSLEFDD
60 70 80 90 100
AGGEGVTSHV DDEYRWAGVE DPKVMITTSR DPSSRLKMFA KELKLVFPGA
110 120 130 140 150
QRMNRGRHEV GALVRACKAN GVTDLLVVHE HRGTPVGLIV SHLPFGPTAY
160 170 180 190 200
FTLCNVVMRH DIPDLGTMSE AKPHLITHGF SSRLGKRVSD ILRYLFPVPK
210 220 230 240 250
DDSHRVITFA NQDDYISFRH HVYKKTDHRN VELTEVGPRF ELKLYMIRLG
260 270 280
TLEQEATADV EWRWHPYTNT ARKRVFLSTE
Length:280
Mass (Da):31,947
Last modified:February 22, 2012 - v1
Checksum:i5CCACDBC72F9E0E1
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q96G21IMP4_HUMAN
U3 small nucleolar ribonucleoprotei...
IMP4 BXDC4
291Annotation score:
B8ZZ47B8ZZ47_HUMAN
U3 small nucleolar ribonucleoprotei...
IMP4
248Annotation score:
E7ENR5E7ENR5_HUMAN
U3 small nucleolar ribonucleoprotei...
IMP4
236Annotation score:
B9A008B9A008_HUMAN
U3 small nucleolar ribonucleoprotei...
IMP4
172Annotation score:
F8WCN0F8WCN0_HUMAN
U3 small nucleolar ribonucleoprotei...
IMP4
76Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC132479 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000452955; ENSP00000409371; ENSG00000136718
UCSCiuc061nub.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC132479 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliH0Y714
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiH0Y714, 7 interactors

Proteomic databases

EPDiH0Y714
MaxQBiH0Y714
PeptideAtlasiH0Y714
PRIDEiH0Y714

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000452955; ENSP00000409371; ENSG00000136718
UCSCiuc061nub.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000136718.9
HGNCiHGNC:30856 IMP4
OpenTargetsiENSG00000136718
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG2781 Eukaryota
COG2136 LUCA
GeneTreeiENSGT00550000074987

Miscellaneous databases

ChiTaRSiIMP4 human

Gene expression databases

BgeeiENSG00000136718 Expressed in 222 organ(s), highest expression level in body of pancreas
ExpressionAtlasiH0Y714 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR007109 Brix
PfamiView protein in Pfam
PF04427 Brix, 1 hit
SMARTiView protein in SMART
SM00879 Brix, 1 hit
PROSITEiView protein in PROSITE
PS50833 BRIX, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH0Y714_HUMAN
AccessioniPrimary (citable) accession number: H0Y714
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 12, 2018
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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