ARID1B

Functionⁱ

GO - Molecular functionⁱ

DNA binding Source: InterPro

View the complete GO annotation on QuickGO ...

GO - Biological processⁱ

chromatin remodeling Source: InterPro

View the complete GO annotation on QuickGO ...

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: AT-rich interactive domain-containing protein 1BImported
Gene namesⁱ	Name:ARID1BImported
Organismⁱ	Homo sapiens (Human)Imported
Taxonomic identifierⁱ	9606 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo
Proteomesⁱ	UP000005640 Componentⁱ: Chromosome 6

Organism-specific databases

EuPathDBⁱ	HostDB:ENSG00000049618.21
Human Gene Nomenclature Database More...HGNCⁱ	HGNC:18040 ARID1B

Keywords - Cellular componentⁱ

NucleusSAAS annotation

Pathology & Biotechⁱ

Organism-specific databases

Open Targets More...OpenTargetsⁱ	ENSG00000049618

OpenTargetsⁱ

ENSG00000049618

PTM / Processingⁱ

Proteomic databases

MaxQB - The MaxQuant DataBase More...MaxQBⁱ	H0Y3S9
PeptideAtlas More...PeptideAtlasⁱ	H0Y3S9
PRIDEⁱ	H0Y3S9

Expressionⁱ

Gene expression databases

Bgeeⁱ	ENSG00000049618 Expressed in 217 organ(s), highest expression level in female reproductive system
ExpressionAtlasⁱ	H0Y3S9 baseline and differential

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	H0Y3S9
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	120 – 211	ARIDInterPro annotationAdd BLAST		92

Phylogenomic databases

eggNOGⁱ	KOG2510 Eukaryota ENOG410Y034 LUCA
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00550000074575

Family and domain databases

Gene3Dⁱ	1.10.150.60, 1 hit
InterProⁱ	View protein in InterPro IPR038040 ARID1B IPR001606 ARID_dom IPR036431 ARID_dom_sf IPR021906 BAF250/Osa
PANTHERⁱ	PTHR12656 PTHR12656, 2 hits PTHR12656:SF11 PTHR12656:SF11, 2 hits
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF01388 ARID, 1 hit
SMARTⁱ	View protein in SMART SM00501 BRIGHT, 1 hit
SUPFAMⁱ	SSF46774 SSF46774, 1 hit
PROSITEⁱ	View protein in PROSITE PS51011 ARID, 1 hit

Sequence (1+)ⁱ

Sequence statusⁱ: Fragment.

This entry has 1 described isoform and 16 potential isoforms that are computationally mapped.Show all Align All

H0Y3S9-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
AAVMQAAANS AQSRQGSFPG MNQSGLMASS SPYSQPMNNS SSLMNTQAPP 
        60         70         80         90        100
YSMAPAMVNS SAASVGLADM MSPGESKLPL PLKADGKEEG TPQPESKSKK 
       110        120        130        140        150
SSSSTTTGEK ITKVYELGNE PERKLWVDRY LTFMEERGSP VSSLPAVGKK 
       160        170        180        190        200
PLDLFRLYVC VKEIGGLAQV NKNKKWRELA TNLNVGTSSS AASSLKKQYI 
       210        220        230        240        250
QYLFAFECKI ERGEEPPPEV FSTGDTKKQP KLQPPSPGKW RRCSHWPRKA 
       260        270 
QAPGLGGSGK VVSQSGQQGT WDF

Length:273

Mass (Da):29,454

Last modified:February 22, 2012 - v1

Checksum:ⁱ3F8771AB7F6326A0

GO

Computationally mapped potential isoform sequencesⁱ

There are 16 potential isoforms mapped to this entry.BLAST Align Show all Add to basket

	Entry	Entry name	Protein names	Gene names	Length	Annotation

	Q8NFD5	ARI1B_HUMAN	AT-rich interactive domain-containi... AT-rich interactive domain-containing protein 1B, ARID domain-containing protein 1B (BRG1-associated factor 250b, BAF250B) (BRG1-binding protein hELD/OSA1) (Osa homolog 2, hOsa2) (p250R)	ARID1B BAF250B, DAN15, KIAA1235, OSA2	2,236	Annotation score:
	H0Y7H8	H0Y7H8_HUMAN	AT-rich interactive domain-containi... AT-rich interactive domain-containing protein 1B	ARID1B	1,758	Annotation score:
	A0A1B0GVK1	A0A1B0GVK1_HUMAN	AT-rich interactive domain-containi... AT-rich interactive domain-containing protein 1B	ARID1B	1,539	Annotation score:
	A0A1B0GWJ2	A0A1B0GWJ2_HUMAN	AT-rich interactive domain-containi... AT-rich interactive domain-containing protein 1B	ARID1B	1,479	Annotation score:
	A0A1B0GTJ8	A0A1B0GTJ8_HUMAN	AT-rich interactive domain-containi... AT-rich interactive domain-containing protein 1B	ARID1B	1,495	Annotation score:
	A0A1B0GV63	A0A1B0GV63_HUMAN	AT-rich interactive domain-containi... AT-rich interactive domain-containing protein 1B	ARID1B	1,349	Annotation score:
	H0Y2R3	H0Y2R3_HUMAN	AT-rich interactive domain-containi... AT-rich interactive domain-containing protein 1B	ARID1B	727	Annotation score:
	A0A1B0GTI6	A0A1B0GTI6_HUMAN	AT-rich interactive domain-containi... AT-rich interactive domain-containing protein 1B	ARID1B	312	Annotation score:
	A0A1B0GU09	A0A1B0GU09_HUMAN	AT-rich interactive domain-containi... AT-rich interactive domain-containing protein 1B	ARID1B	186	Annotation score:
	A0A1B0GU65	A0A1B0GU65_HUMAN	AT-rich interactive domain-containi... AT-rich interactive domain-containing protein 1B	ARID1B	191	Annotation score:
There are more potential isoformsShow all

Experimental Info

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Non-terminal residueⁱ	1	Imported		1

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AL049820 Genomic DNA No translation available. AL136091 Genomic DNA No translation available. AL162578 Genomic DNA No translation available. AL355297 Genomic DNA No translation available. AL591545 Genomic DNA No translation available. KF458328 Genomic DNA No translation available. KF458335 Genomic DNA No translation available.

Select the link destinations:
EMBLⁱ
GenBankⁱ
DDBJⁱ

Links Updated

AL049820 Genomic DNA No translation available.
AL136091 Genomic DNA No translation available.
AL162578 Genomic DNA No translation available.
AL355297 Genomic DNA No translation available.
AL591545 Genomic DNA No translation available.
KF458328 Genomic DNA No translation available.
KF458335 Genomic DNA No translation available.

Genome annotation databases

Ensemblⁱ	ENST00000400790; ENSP00000383596; ENSG00000049618
UCSC genome browser More...UCSCⁱ	uc063sml.1 human

Similar proteinsⁱ

90% Identity
50% Identity

Protein	Similar proteins		Species	Score	Length	Source
H0Y3S9	ARID1B isoform 25 (Fragment)		PONAB		273	UniRef90_H0Y3S9
ARID1B isoform 18 (Fragment)		PANTR		273

Protein	Similar proteins		Species	Score	Length	Source
H0Y3S9	ARID1B isoform 25 (Fragment)		PONAB		273	UniRef50_H0Y3S9
ARID1B isoform 18 (Fragment)		PANTR		273
ARI1A		blackstripe livebearer		189
Uncharacterized protein (Fragment)		CEREH		286
Uncharacterized protein		ONCMY		241
+1

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AL049820 Genomic DNA No translation available. AL136091 Genomic DNA No translation available. AL162578 Genomic DNA No translation available. AL355297 Genomic DNA No translation available. AL591545 Genomic DNA No translation available. KF458328 Genomic DNA No translation available. KF458335 Genomic DNA No translation available.

Select the link destinations:
EMBLⁱ
GenBankⁱ
DDBJⁱ

Links Updated

AL049820 Genomic DNA No translation available.
AL136091 Genomic DNA No translation available.
AL162578 Genomic DNA No translation available.
AL355297 Genomic DNA No translation available.
AL591545 Genomic DNA No translation available.
KF458328 Genomic DNA No translation available.
KF458335 Genomic DNA No translation available.

3D structure databases

ProteinModelPortalⁱ	H0Y3S9
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Proteomic databases

MaxQBⁱ	H0Y3S9
PeptideAtlasⁱ	H0Y3S9
PRIDEⁱ	H0Y3S9

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

Ensemblⁱ	ENST00000400790; ENSP00000383596; ENSG00000049618
UCSCⁱ	uc063sml.1 human

Organism-specific databases

EuPathDBⁱ	HostDB:ENSG00000049618.21
HGNCⁱ	HGNC:18040 ARID1B
OpenTargetsⁱ	ENSG00000049618
GenAtlas: human gene database More...GenAtlasⁱ	Search...

Phylogenomic databases

eggNOGⁱ	KOG2510 Eukaryota ENOG410Y034 LUCA
GeneTreeⁱ	ENSGT00550000074575

Miscellaneous databases

ChiTaRSⁱ	ARID1B human

ChiTaRSⁱ

ARID1B human

Gene expression databases

Bgeeⁱ	ENSG00000049618 Expressed in 217 organ(s), highest expression level in female reproductive system
ExpressionAtlasⁱ	H0Y3S9 baseline and differential

Family and domain databases

Gene3Dⁱ	1.10.150.60, 1 hit
InterProⁱ	View protein in InterPro IPR038040 ARID1B IPR001606 ARID_dom IPR036431 ARID_dom_sf IPR021906 BAF250/Osa
PANTHERⁱ	PTHR12656 PTHR12656, 2 hits PTHR12656:SF11 PTHR12656:SF11, 2 hits
Pfamⁱ	View protein in Pfam PF01388 ARID, 1 hit
SMARTⁱ	View protein in SMART SM00501 BRIGHT, 1 hit
SUPFAMⁱ	SSF46774 SSF46774, 1 hit
PROSITEⁱ	View protein in PROSITE PS51011 ARID, 1 hit
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	H0Y3S9_HUMAN
Accessionⁱ	H0Y3S9Primary (citable) accession number: H0Y3S9
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	February 22, 2012
	Last sequence update:	February 22, 2012
	Last modified:	September 12, 2018
	This is version 48 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)
Disclaimer	Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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UniProtKB - H0Y3S9 (H0Y3S9_HUMAN)

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AT-rich interactive domain-containing protein 1B

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

Organism-specific databases

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Nucleus

Nucleus

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Phylogenomic databases

Family and domain databases

Experimental Info

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Miscellaneous databases

Gene expression databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

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Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

Pathology & Biotechⁱ

PTM / Processingⁱ

Expressionⁱ

Structureⁱ

Family & Domainsⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ