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Protein
Submitted name:

Nectin cell adhesion molecule 3

Gene

NECTIN3

Organism
Otolemur garnettii (Small-eared galago) (Garnett's greater bushbaby)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Nectin cell adhesion molecule 3Imported
Gene namesi
Name:NECTIN3Imported
OrganismiOtolemur garnettii (Small-eared galago) (Garnett's greater bushbaby)Imported
Taxonomic identifieri30611 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesStrepsirrhiniLorisiformesGalagidaeOtolemur
Proteomesi
  • UP000005225 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei405 – 428HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi30611.ENSOGAP00000007969

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini59 – 165Ig-likeInterPro annotationAdd BLAST107
Domaini170 – 258Ig-likeInterPro annotationAdd BLAST89
Domaini269 – 354Ig-likeInterPro annotationAdd BLAST86

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiENOG410IGR7 Eukaryota
ENOG410ZRVN LUCA
GeneTreeiENSGT00900000140811
InParanoidiH0WZF2
OMAiTITQVSW
OrthoDBiEOG091G0BLQ
TreeFamiTF331051

Family and domain databases

Gene3Di2.60.40.10, 3 hits
InterProiView protein in InterPro
IPR013162 CD80_C2-set
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003599 Ig_sub
IPR013106 Ig_V-set
IPR033319 Nectin-3
PANTHERiPTHR23277:SF12 PTHR23277:SF12, 1 hit
PfamiView protein in Pfam
PF08205 C2-set_2, 1 hit
PF07686 V-set, 1 hit
SMARTiView protein in SMART
SM00409 IG, 1 hit
SUPFAMiSSF48726 SSF48726, 3 hits
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 3 hits

Sequencei

Sequence statusi: Complete.

H0WZF2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARTPGPAPL CPGGGKAQLS SASPPGAGLL LPPPTPPPLL LLLFPLLLFS
60 70 80 90 100
RLCGALAGPI IVEPHVTAIW GKNVSLKCLI EVNETITQIS WEKIHGKSSQ
110 120 130 140 150
TVAVHHPQYG FSVQGEYQGR VLFKNYSLND ATITLHNIGF SDSGKYICKA
160 170 180 190 200
VTFPLGNAQS STTVTVLVEP TVSLIKGADS LIDGGNETVA AICIAATGKP
210 220 230 240 250
VARIDWEGDL GKMESTTTSF PNETATIVSQ YKLFPTRFAR GRRITCVVKH
260 270 280 290 300
PALEKDIRYS FILDIQYAPE VSITGYDGNW FVGRKGVNLK CNADANPPPF
310 320 330 340 350
KSVWSRLDGQ WPDGLLASDS TLHFVYPLTF NYSGVYICRV TNSLGQRSDQ
360 370 380 390 400
KVIYISDPPT TTTLQPTIQW RPSTADIEDL ATEHKKLPFP LSTLATIKDD
410 420 430 440 450
TIGTIIASVV GGALFIVLVS VLAGIFCYRR RRTFRGDYFA KNYIPPSDMQ
460 470 480 490 500
KESQIDVLQQ DELDSYPDSV KKENKNPVNN LIRKDYLEEP EKTQWNNVEN
510 520 530 540
LNRFERPMDY YENLKMGMKF VNDEHYDENE DDLVSHVDGS VISRREWYV
Length:549
Mass (Da):60,912
Last modified:February 22, 2012 - v1
Checksum:iBD591D1E7CCF93E2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAQR03138385 Genomic DNA No translation available.
AAQR03138386 Genomic DNA No translation available.
AAQR03138387 Genomic DNA No translation available.
AAQR03138388 Genomic DNA No translation available.
AAQR03138389 Genomic DNA No translation available.
RefSeqiXP_003797730.1, XM_003797682.2

Genome annotation databases

EnsembliENSOGAT00000008892; ENSOGAP00000007969; ENSOGAG00000008891
GeneIDi100951380

Similar proteinsi

Entry informationi

Entry nameiH0WZF2_OTOGA
AccessioniPrimary (citable) accession number: H0WZF2
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: May 23, 2018
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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