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Protein
Submitted name:

RAB GTPase activating protein 1 like

Gene

RABGAP1L

Organism
Cavia porcellus (Guinea pig)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
RAB GTPase activating protein 1 likeImported
Gene namesi
Name:RABGAP1LImported
OrganismiCavia porcellus (Guinea pig)Imported
Taxonomic identifieri10141 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaHystricomorphaCaviidaeCavia
Proteomesi
  • UP000005447 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSCPOG00000014829

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10141.ENSCPOP00000013362

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini146 – 261PIDInterPro annotationAdd BLAST116
Domaini548 – 734Rab-GAP TBCInterPro annotationAdd BLAST187

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili817 – 897Sequence analysisAdd BLAST81
Coiled coili902 – 936Sequence analysisAdd BLAST35
Coiled coili975 – 1030Sequence analysisAdd BLAST56

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1102 Eukaryota
COG5210 LUCA
GeneTreeiENSGT00750000117238
InParanoidiH0VRY1
OrthoDBiEOG091G0AIH
TreeFamiTF317184

Family and domain databases

Gene3Di2.30.29.30, 1 hit
InterProiView protein in InterPro
IPR022164 Kinesin-like
IPR011993 PH-like_dom_sf
IPR006020 PTB/PI_dom
IPR000195 Rab-GTPase-TBC_dom
IPR035969 Rab-GTPase_TBC_sf
IPR033185 RabGAP1
PANTHERiPTHR22957:SF205 PTHR22957:SF205, 1 hit
PfamiView protein in Pfam
PF12473 DUF3694, 1 hit
PF00640 PID, 1 hit
PF00566 RabGAP-TBC, 1 hit
SMARTiView protein in SMART
SM00462 PTB, 1 hit
SM00164 TBC, 1 hit
SUPFAMiSSF47923 SSF47923, 2 hits
PROSITEiView protein in PROSITE
PS01179 PID, 1 hit
PS50086 TBC_RABGAP, 1 hit

Sequencei

Sequence statusi: Complete.

H0VRY1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWEREVYRTE MEVRASLQKV SGSSDSVAAM NSEGFVLVPQ QADDASTKDD
60 70 80 90 100
EKPQLKIVSN GDEQLEKAME EILRDSEKGQ SSPLVDCQSS SEKPNRSTGD
110 120 130 140 150
VSASQTYKPS LHLILDPSNT EISTPRPSSP SGISEEDSVL FNKLTYLGCM
160 170 180 190 200
KVSSPRNEVE ALRAMATMKF SSQNPFPVTL YVPNVPEGSV RIIDQSRNME
210 220 230 240 250
IASFPIYKVL FCARGHDGTT ESNCFAFTES SHGSEEFQIH VFSCEIKEAV
260 270 280 290 300
SRILYSFSTA FKRSSRQAPD VKDSIIPTPD SDVFTFSVSL EVKEDDGKGN
310 320 330 340 350
FSPVPKDRDK FYFKLKQGIE KKIVITVQQL SNKELAIERC FGMLLSPGRN
360 370 380 390 400
VKNSDMHLLD MESMGKSSDG RAYVITGMWN PNAPIFLALN EETPKDKRVY
410 420 430 440 450
MTVAVDMVVT EVVEPVRFLL ETVVRVYPAN ERFWYFSRKT FTETFFMRLK
460 470 480 490 500
QSEGKGHASA GDAIYEVVSL QRQCDKEEPV TPTSGGVPVS PQEDEAEEES
510 520 530 540 550
DNELSSGTGD VSKDCPEKIL YSWGELLGRW HSNLGVRPKG LSTLVKSGVP
560 570 580 590 600
EALRAEVWQL LAGCHDNQAM LDRYRILITK DSAQENVITR DIHRTFPAHD
610 620 630 640 650
YFKDTGGDGQ ESLYKICKAY SVFDEDIGYC QGQSFLAAVL LLHMPEEQAF
660 670 680 690 700
CVLVKIMYDY GLRDLYKNNF EDLHCKFYQL ERLMQEQLPD LHSRFCDLNL
710 720 730 740 750
EAHMYASQWF LTLFTAKFPL CMVFHIIDLL LCEGLNIIFH VALALLKTSK
760 770 780 790 800
EDLLQADFEG ALKFFRVQLP KRYRAEENAR RLMEQACNIK VPTKKLKKYE
810 820 830 840 850
KEYQTMRESQ LQQEDPMDRY KRENRRLQEA SMRLEQENDD LAHELVTSKI
860 870 880 890 900
ALRNDLDQAE DKADVLNKEL LLTKQRLVET EEEKRKQEEE TTQLKEVFRK
910 920 930 940 950
QLEKAEYEIK KTTAIIAEYK QICSQLSTRL EKQQAASKEE LEAVKGKMMA
960 970 980 990 1000
CKHCSDIFSK EGALKLAVIS RDDQGIEADD EKDSLKKQLR EMELELAQTK
1010 1020 1030 1040 1050
LQLVEAKCKI QELEHQRGAL MNEIQAAKNS WFSKTLNSIK TATGTQPLQP
1060
PQATQPPKES T
Length:1,061
Mass (Da):120,754
Last modified:November 22, 2017 - v2
Checksum:i70DAEF6BEE76CC9B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAKN02017758 Genomic DNA No translation available.
AAKN02017759 Genomic DNA No translation available.
AAKN02017760 Genomic DNA No translation available.
AAKN02017761 Genomic DNA No translation available.
AAKN02017762 Genomic DNA No translation available.
AAKN02017763 Genomic DNA No translation available.
AAKN02017764 Genomic DNA No translation available.
AAKN02017765 Genomic DNA No translation available.
AAKN02017766 Genomic DNA No translation available.
AAKN02017767 Genomic DNA No translation available.
RefSeqiXP_005005905.1, XM_005005848.2

Genome annotation databases

EnsembliENSCPOT00000014974; ENSCPOP00000013362; ENSCPOG00000014829
GeneIDi100719248

Similar proteinsi

Entry informationi

Entry nameiH0VRY1_CAVPO
AccessioniPrimary (citable) accession number: H0VRY1
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: November 22, 2017
Last modified: March 28, 2018
This is version 43 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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