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Protein

Superoxide dismutase [Cu-Zn]

Gene

sodC

Organism
Gordonia effusa NBRC 100432
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Protein has several cofactor binding sites:

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandCopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodCImported
ORF Names:GOEFS_036_00300Imported
OrganismiGordonia effusa NBRC 100432Imported
Taxonomic identifieri1077974 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesGordoniaceaeGordonia
Proteomesi
  • UP000035034 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 35Sequence analysisAdd BLAST35
ChainiPRO_500353690136 – 226Superoxide dismutase [Cu-Zn]Sequence analysisAdd BLAST191

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini83 – 222Sod_CuInterPro annotationAdd BLAST140

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

OrthoDBiPOG091H05EB

Family and domain databases

Gene3Di2.60.40.200, 1 hit
InterProiView protein in InterPro
IPR036423 SOD-like_Cu/Zn_dom_sf
IPR024134 SOD_Cu/Zn_/chaperone
IPR018152 SOD_Cu/Zn_BS
IPR001424 SOD_Cu_Zn_dom
PANTHERiPTHR10003 PTHR10003, 1 hit
PfamiView protein in Pfam
PF00080 Sod_Cu, 1 hit
SUPFAMiSSF49329 SSF49329, 1 hit
PROSITEiView protein in PROSITE
PS00332 SOD_CU_ZN_2, 1 hit

Sequencei

Sequence statusi: Complete.

H0QXP0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNSRSATSNT RTARTWARAV AAVGATGVVA VGLVACSNGE EPTDVPGTTP
60 70 80 90 100
SVITGDQAPP GEVTVPGGSS EKVGAVAKLV DAKNNEVGTA IFTPEGAAVK
110 120 130 140 150
VTVEVTKGVA AGFHGLHLHS NGVCDPSTTE PFSSAGGHLQ VDGHTGHPSS
160 170 180 190 200
GDLVSLNVLK NGTGTTITTT DAVTLSQIVG KSIVIHEKPD NFGNIPTRYA
210 220
PSPDQTTMKT GDAGPRLACG VITAKE
Length:226
Mass (Da):22,688
Last modified:February 22, 2012 - v1
Checksum:i6FDDF19ECF6DFB85
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BAEH01000036 Genomic DNA Translation: GAB17591.1
RefSeqiWP_007316929.1, NZ_BAEH01000036.1

Genome annotation databases

EnsemblBacteriaiGAB17591; GAB17591; GOEFS_036_00300

Similar proteinsi

Entry informationi

Entry nameiH0QXP0_9ACTN
AccessioniPrimary (citable) accession number: H0QXP0
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: October 25, 2017
This is version 28 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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