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Protein

Flagellar brake protein YcgR

Gene

ycgR

Organism
Dechlorosoma suillum (strain ATCC BAA-33 / DSM 13638 / PS) (Azospira oryzae)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionTransferaseImported
Ligandc-di-GMPUniRule annotation, Nucleotide-bindingUniRule annotation

Enzyme and pathway databases

BioCyciDSUI640081:G1H1P-1768-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Flagellar brake protein YcgRUniRule annotation
Alternative name(s):
Cyclic di-GMP binding protein YcgRUniRule annotation
Gene namesi
Name:ycgRUniRule annotation
Ordered Locus Names:Dsui_1776Imported
OrganismiDechlorosoma suillum (strain ATCC BAA-33 / DSM 13638 / PS) (Azospira oryzae)Imported
Taxonomic identifieri640081 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesRhodocyclaceaeAzospira
Proteomesi
  • UP000005633 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Bacterial flagellumUniRule annotation

Interactioni

Subunit structurei

Monomer. Interacts with the flagellar basal bodies.UniRule annotation

Protein-protein interaction databases

STRINGi640081.Dsui_1776

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini31 – 137T3SS_YcgR_NInterPro annotationAdd BLAST107
Domaini139 – 256PilZInterPro annotationAdd BLAST118

Sequence similaritiesi

Belongs to the YcgR family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108T7K Bacteria
COG5581 LUCA
OMAiRYIFRID
OrthoDBiPOG091H0NAE

Family and domain databases

HAMAPiMF_01457 YcgR, 1 hit
InterProiView protein in InterPro
IPR009875 PilZ_domain
IPR023787 T3SS_YcgR
IPR009926 T3SS_YcgR_N
PfamiView protein in Pfam
PF07238 PilZ, 1 hit
PF07317 YcgR, 1 hit

Sequencei

Sequence statusi: Complete.

G8QG88-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTDKASEPLE PEAHPVPHHL DVEDDDNYSR YLLYSKAEIL FVLKALVQKG
60 70 80 90 100
VMITVYFDGG NSFLLTSLNH IGADGNSLIF DYGSDDEMNR RALQADKLVF
110 120 130 140 150
TTTLDKVKIQ FSLKGLTQTT FEGRTAFGGK LPETLLRLQR REYYRLTTPI
160 170 180 190 200
ANPIKVSVDV ILADGTKTTI EANMLDISGG GIGLMLPLSM GETFAIGNVF
210 220 230 240 250
RDCKFTLPEE GQLVTALSVR NSFPVTTKTG SQYLRIGCEY VDLPGTRLTM
260 270
IQRYITRIER ERKARISGLE
Length:270
Mass (Da):30,139
Last modified:February 22, 2012 - v1
Checksum:i888D7A9578B43AD2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003153 Genomic DNA Translation: AEV26161.1
RefSeqiWP_014236860.1, NC_016616.1

Genome annotation databases

EnsemblBacteriaiAEV26161; AEV26161; Dsui_1776
KEGGidsu:Dsui_1776

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003153 Genomic DNA Translation: AEV26161.1
RefSeqiWP_014236860.1, NC_016616.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi640081.Dsui_1776

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEV26161; AEV26161; Dsui_1776
KEGGidsu:Dsui_1776

Phylogenomic databases

eggNOGiENOG4108T7K Bacteria
COG5581 LUCA
OMAiRYIFRID
OrthoDBiPOG091H0NAE

Enzyme and pathway databases

BioCyciDSUI640081:G1H1P-1768-MONOMER

Family and domain databases

HAMAPiMF_01457 YcgR, 1 hit
InterProiView protein in InterPro
IPR009875 PilZ_domain
IPR023787 T3SS_YcgR
IPR009926 T3SS_YcgR_N
PfamiView protein in Pfam
PF07238 PilZ, 1 hit
PF07317 YcgR, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiG8QG88_DECSP
AccessioniPrimary (citable) accession number: G8QG88
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: March 28, 2018
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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