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UniProtKB - G5EGG3 (G5EGG3_CAEEL)
Protein
Submitted name:
Paired Zinc Finger protein
Gene
pzf-1
Organism
Caenorhabditis elegans
Status
Functioni
GO - Molecular functioni
- DNA-binding transcription factor activity, RNA polymerase II-specific Source: GO_Central
- sequence-specific DNA binding Source: GO_Central
GO - Biological processi
- meiotic chromosome segregation Source: WormBase
- positive regulation of meiotic cell cycle Source: WormBase
- regulation of transcription by RNA polymerase II Source: GO_Central
Keywordsi
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Submitted name: Paired Zinc Finger proteinImported |
Gene namesi | Name:pzf-1Imported ORF Names:CELE_T05G11.1Imported, T05G11.1Imported |
Organismi | Caenorhabditis elegansImported |
Taxonomic identifieri | 6239 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditina › Rhabditomorpha › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis |
Proteomesi |
|
Organism-specific databases
WormBasei | T05G11.1b ; CE45365 ; WBGene00011505 ; pzf-1 |
Expressioni
Gene expression databases
Bgeei | WBGene00011505, Expressed in adult organism and 4 other tissues |
ExpressionAtlasi | G5EGG3, baseline and differential |
Structurei
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 144 – 167 | C2H2-typeInterPro annotationAdd BLAST | 24 | |
Domaini | 274 – 297 | C2H2-typeInterPro annotationAdd BLAST | 24 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 80 – 101 | DisorderedSequence analysisAdd BLAST | 22 |
Keywords - Domaini
Zinc-fingerPROSITE-ProRule annotationPhylogenomic databases
HOGENOMi | CLU_541043_0_0_1 |
OMAi | HFSRMGN |
Family and domain databases
InterProi | View protein in InterPro IPR013087, Znf_C2H2_type |
SMARTi | View protein in SMART SM00355, ZnF_C2H2, 7 hits |
PROSITEi | View protein in PROSITE PS00028, ZINC_FINGER_C2H2_1, 4 hits PS50157, ZINC_FINGER_C2H2_2, 2 hits |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
G5EGG3-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MTCHMCLLCN RRIPENETLR EHMKNKHNIW KLFICVCCNW SFGTEIYLKC
60 70 80 90 100
HEECMKSTGR PGLLKPLAMP MTAPAREASA LNTDPQNGSD DVPHSSPSPV
110 120 130 140 150
PMIAENSIIQ ASSLKMEPIE SADRSSASTS TPRTLVSGTP REKIPCGFCG
160 170 180 190 200
KDFFHEGSLR EHRRRFHMTG HTCLLCNRQI PENETVRDHM KSQHNIKKVY
210 220 230 240 250
NCLCCNWTFL NQVHLISHKT CLKQTGKPCC RPGHMEPLAI PRTASIRQFF
260 270 280 290 300
TLKTETQSGD DDSAAGSQLF SARLSCKSCG KFFYSERSLS KHHRQIHMSG
310 320 330 340 350
HVCVLCNHQM PKTVTVQEHM EKEHNIRLVF NCRCCNWSFA TRRCLMSHVE
360 370 380 390 400
CLKKAGDARN VKPVAIPRMA ADSILQSLKE SEAQEYPDFS AASTTSSGPA
410 420 430 440 450
STLKTPRMDF KKNLKICTDA VQILVGNGLF SNEQLAQTET WVMIFSNANK
460
LFHSMNSFGE PSVSRDIPM
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketG5EGQ2 | G5EGQ2_CAEEL | Paired Zinc Finger protein | pzf-1 CELE_T05G11.1, T05G11.1 | 504 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BX284605 Genomic DNA Translation: CBW48438.1 |
RefSeqi | NP_001256689.1, NM_001269760.1 |
Genome annotation databases
EnsemblMetazoai | T05G11.1b.1; T05G11.1b.1; WBGene00011505 |
GeneIDi | 188142 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BX284605 Genomic DNA Translation: CBW48438.1 |
RefSeqi | NP_001256689.1, NM_001269760.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
EnsemblMetazoai | T05G11.1b.1; T05G11.1b.1; WBGene00011505 |
GeneIDi | 188142 |
Organism-specific databases
CTDi | 188142 |
WormBasei | T05G11.1b ; CE45365 ; WBGene00011505 ; pzf-1 |
Phylogenomic databases
HOGENOMi | CLU_541043_0_0_1 |
OMAi | HFSRMGN |
Gene expression databases
Bgeei | WBGene00011505, Expressed in adult organism and 4 other tissues |
ExpressionAtlasi | G5EGG3, baseline and differential |
Family and domain databases
InterProi | View protein in InterPro IPR013087, Znf_C2H2_type |
SMARTi | View protein in SMART SM00355, ZnF_C2H2, 7 hits |
PROSITEi | View protein in PROSITE PS00028, ZINC_FINGER_C2H2_1, 4 hits PS50157, ZINC_FINGER_C2H2_2, 2 hits |
MobiDBi | Search... |
Entry informationi
Entry namei | G5EGG3_CAEEL | |
Accessioni | G5EGG3Primary (citable) accession number: G5EGG3 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | December 14, 2011 |
Last sequence update: | December 14, 2011 | |
Last modified: | September 29, 2021 | |
This is version 69 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |