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Entry version 60 (18 Sep 2019)
Sequence version 1 (14 Dec 2011)
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Protein

Non-centrosomal microtubule array protein 1

Gene

noca-1

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Plays a role in the assembly of microtubule arrays in the germline acting redundantly with ptrn-1 to control circumferential microtubule assembly along the body which is necessary for larval development, viability, and morphology and integrity of the epidermis (PubMed:26371552). Required for microtubule stability and anchorage by binding to microtubule minus ends (PubMed:26371552). Recruited to hemidesomosomes in early embryonic elongation to direct the nucleation and growth of non-centrosomal microtubules (PubMed:26586219).2 Publications
Isoform b: Required for normal nuclear migration in the embryonic epidermis.1 Publication
Isoform h: Directs the assembly of non-centrosomal microtubule arrays that determine the position of nuclei within intracellular compartments in the epidermis and this is independent of ptrn-1 activity.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Non-centrosomal microtubule array protein 1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:noca-1Imported
ORF Names:T09E8.1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCaenorhabditis elegansImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri6239 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001940 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome V

Organism-specific databases

WormBase

More...
WormBasei
T09E8.1a ; CE31987 ; WBGene00011647 ; noca-1
T09E8.1b ; CE31988 ; WBGene00011647 ; noca-1
T09E8.1c ; CE41451 ; WBGene00011647 ; noca-1
T09E8.1d ; CE31990 ; WBGene00011647 ; noca-1
T09E8.1e ; CE47381 ; WBGene00011647 ; noca-1
T09E8.1f ; CE39958 ; WBGene00011647 ; noca-1
T09E8.1g ; CE48378 ; WBGene00011647 ; noca-1
T09E8.1h ; CE51088 ; WBGene00011647 ; noca-1
T09E8.1i ; CE11698 ; WBGene00011647 ; noca-1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cell junction, Cell membrane, Cytoplasm, Cytoskeleton, Membrane

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the ‘Pathology and Biotech’ section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

Isoform b: Deletion results in slower embryonic development, mutants that are 5% shorter than their wild-type conterparts, and also leads to the prevention of nuclear migration in the embryonic epidermis (PubMed:26371552, PubMed:26586219). RNAi-mediated knockdown results in fragmentation of the cadherin-based junctional complex in embryos and intermediate filaments display a diffuse pattern in older embryos (PubMed:26586219). RNAi-mediated knockdown of isoform h results in disrupted germline architecture and sterility (PubMed:26371552).2 Publications

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004361741 – 922Non-centrosomal microtubule array protein 1CuratedAdd BLAST922

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
G5EEK3

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
G5EEK3

PeptideAtlas

More...
PeptideAtlasi
G5EEK3

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of the gene product at various stages of a cell, tissue or organism development. By default, the information is derived from experiments at the mRNA level, unless specified ‘at the protein level’.<p><a href='/help/developmental_stage' target='_top'>More...</a></p>Developmental stagei

First expressed in between seam cells at the lima-bean stage of embryogenesis (PubMed:26586219). Expressed in the embryonic epidermis and in puncta in the epidermal syncytium and also in between the epidermal body syncytium and the seam cells of larvae (PubMed:26371552).2 Publications

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
WBGene00011647 Expressed in 5 organ(s), highest expression level in pharyngeal muscle cell (C elegans)

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

Protein interaction database and analysis system

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IntActi
G5EEK3, 3 interactors

STRING: functional protein association networks

More...
STRINGi
6239.T09E8.1c

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
G5EEK3

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili564 – 728Sequence analysisAdd BLAST165

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi74 – 189Ser-richPROSITE-ProRule annotationAdd BLAST116

Keywords - Domaini

Coiled coil

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410JM0P Eukaryota
ENOG410K8Q3 Eukaryota
ENOG4110K4V LUCA
ENOG41115WC LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000018946

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
G5EEK3

Identification of Orthologs from Complete Genome Data

More...
OMAi
QNRATPI

Database of Orthologous Groups

More...
OrthoDBi
1658778at2759

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (9)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 9 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform cImported (identifier: G5EEK3-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MSNERVSTGS LGERLMLRTR STRGSVRETL SKAIRSTLGR ASSMERKDMP
60 70 80 90 100
DRPKYGTALT AMTSTTPPSP KDRSSDSGDG DSPRPRKFSS KECARIYFSN
110 120 130 140 150
TSSEHSSRSN SSTPRRVRHT TASSGYGSLS HLPPISYRKS SDPLNSLMSQ
160 170 180 190 200
SMYVQSPGMH IDEPKCTSLS QRRLYYEDSS ETYIPSSPSL TTLKDFMMTN
210 220 230 240 250
DDETFDDFDF DNDDVKSVIS SASTSRIFSV DNRMSKYQKN QSLRQFLNSP
260 270 280 290 300
VRLRKRGDTS RRDAVEAGFE PRDTVPRCHS TQSLRDVQRV RSYNNSQFQA
310 320 330 340 350
SDLSLNPNGS IRAACDSTSG SVAPTAVVNP ARNHVISHRQ QHHTSYEKDL
360 370 380 390 400
IPHHNIDVDR RRSLQALNGS SALYQLNNGG SPNGVRSQFS PSDLSIHTPV
410 420 430 440 450
HHVGSRVRVS SVNQICDSNS APQFSIDQRR SVHNIGNPVR NSFVDGIKTT
460 470 480 490 500
STPKNQIAVA PLAHKSRHLS ESRDEMRGGA ERRGSGGQMN LPAYTNYLIR
510 520 530 540 550
HSGEERLVDG PVTNASDARI AYLEKRIREL ELTQKEQSSH STPSQSRHSS
560 570 580 590 600
SKSSHFNGSS NLSTSEQLRL QEMSDELANK DRKVTSLESK LLKAYQRIER
610 620 630 640 650
LNEEYDGKIK NLMYDSERAR DDLTRCVDKI QQLENELDET RAAVQNGDHA
660 670 680 690 700
NEQEYHELRD KIWKQERELQ ESRTLLTRLR EKEAEFERMR SEKGYLELKN
710 720 730 740 750
ENLNKKLEAK KRAVEELERS VSTLRLEQTI CQQSCSSGST PLADEMEIMS
760 770 780 790 800
DIRPSLARPY TKAHSTLGSH NMSPLSHSKS SGLTKSFSNF ALNSSKQRDD
810 820 830 840 850
ITANMSRSIR EQNRHITMCR AMVVCLKDTV DRMARGENPD VARLLGVKLN
860 870 880 890 900
VMSESEMEDD EDHEADASQP FSMMSAESAL SKQCGKLADL DKDLDTIRCQ
910 920
LADWHGQTNA EGDGDRDVCR VQ
Length:922
Mass (Da):103,684
Last modified:December 14, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i920C15936BAEDC1B
GO
Isoform aImported (identifier: G5EEK3-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-251: MSNERVSTGS...SLRQFLNSPV → MCLVCAGCKV...PIRRKSHGNI

Show »
Length:747
Mass (Da):84,010
Checksum:i8069879C2EC95A86
GO
Isoform bImported (identifier: G5EEK3-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-250: MSNERVSTGS...QSLRQFLNSP → MASLCNSIIGWIKNDKE

Show »
Length:689
Mass (Da):77,614
Checksum:i0DC062E01197FF01
GO
Isoform dImported (identifier: G5EEK3-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-456: MSNERVSTGS...IKTTSTPKNQ → MNICCCGGAM...PALNRKKRPE

Show »
Length:547
Mass (Da):61,799
Checksum:i7761B4BF2AB4FC20
GO
Isoform eImported (identifier: G5EEK3-5) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-427: MSNERVSTGS...SNSAPQFSID → MSLVSGKTES...RKDRHNWKKS

Show »
Length:547
Mass (Da):62,180
Checksum:i2B3DBCF2572B7967
GO
Isoform fImported (identifier: G5EEK3-6) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-250: MSNERVSTGS...QSLRQFLNSP → MLQPPSPRLGKRNIIKNVT

Show »
Length:691
Mass (Da):77,855
Checksum:i0B768E9A456266DD
GO
Isoform gImported (identifier: G5EEK3-7) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-370: MSNERVSTGS...RRSLQALNGS → MQSIREPRSV...RIRPDNQLSA

Show »
Length:595
Mass (Da):67,415
Checksum:i8D1C99EA569AA0FD
GO
Isoform hImported (identifier: G5EEK3-8) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     2-251: SNERVSTGSL...SLRQFLNSPV → LKQLLALTCM...EVDKIHQDRF

Show »
Length:922
Mass (Da):103,181
Checksum:i86F44A064C8D7754
GO
Isoform iImported (identifier: G5EEK3-9) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-264: MSNERVSTGS...KRGDTSRRDA → MLKQLLALTC...FVLTLCVPYA
     265-922: Missing.

Note: No experimental confirmation available.Curated
Show »
Length:264
Mass (Da):29,043
Checksum:i3DEF7FD42069917E
GO

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0582741 – 456MSNER…TPKNQ → MNICCCGGAMGRFYTKMIER LTGGGSPTSDQNGNSHHHHH HLPPAPRHLSSSHHQIETIS GSSKLRAQSGSPALNRKKRP E in isoform d. CuratedAdd BLAST456
Alternative sequenceiVSP_0582751 – 427MSNER…QFSID → MSLVSGKTESSARWSIRPSC SCNDSLFTISDTECSEIEAD MRRKDRHNWKKS in isoform e. CuratedAdd BLAST427
Alternative sequenceiVSP_0582761 – 370MSNER…ALNGS → MQSIREPRSVELRESNKFMR SISHGRASTWRRNRIRPDNQ LSA in isoform g. CuratedAdd BLAST370
Alternative sequenceiVSP_0582771 – 264MSNER…SRRDA → MLKQLLALTCMHKKDKNKLA ITAGTAECSNRSPQNSPGSS SEGAADESLNQSVAIPEEAH LNTSQFISLPLSDVSFEAAA SQNRATPIDFGTREVKEDDD VLSDTGRRRSVNLITPSPIP EETEDNLTETPIPVVEHIPR SAIFEPFNHENSPLFSVKAR KKAHEYRSNDSTLSPSSSSN NDDSIRIDSIRVRSSKSATN NQLKGRLTPILGGSLRPIPK KRNRVAFNGNSTFVAPERLC LEVDKIHQDRCRFSFVLTLC VPYA in isoform i. CuratedAdd BLAST264
Alternative sequenceiVSP_0582781 – 251MSNER…LNSPV → MCLVCAGCKVLSTLRAYCTG FMPNITVIIAPKKVLTSNSS SSTSDISMHRSIPEIYVPND KYNEEKPIRRKSHGNI in isoform a. CuratedAdd BLAST251
Alternative sequenceiVSP_0582791 – 250MSNER…FLNSP → MASLCNSIIGWIKNDKE in isoform b. CuratedAdd BLAST250
Alternative sequenceiVSP_0582801 – 250MSNER…FLNSP → MLQPPSPRLGKRNIIKNVT in isoform f. CuratedAdd BLAST250
Alternative sequenceiVSP_0582812 – 251SNERV…LNSPV → LKQLLALTCMHKKDKNKLAI TAGTAECSNRSPQNSPGSSS EGAADESLNQSVAIPEEAHL NTSQFISLPLSDVSFEAAAS QNRATPIDFGTREVKEDDDV LSDTGRRRSVNLITPSPIPE ETEDNLTETPIPVVEHIPRS AIFEPFNHENSPLFSVKARK KAHEYRSNDSTLSPSSSSNN DDSIRIDSIRVRSSKSATNN QLKGRLTPILGGSLRPIPKK RNRVAFNGNSTFVAPERLCL EVDKIHQDRF in isoform h. CuratedAdd BLAST250
Alternative sequenceiVSP_058282265 – 922Missing in isoform i. CuratedAdd BLAST658

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
KT722731 mRNA Translation: ALF12299.1
BX284605 Genomic DNA Translation: CAB03162.1
BX284605 Genomic DNA Translation: CAB54298.2
BX284605 Genomic DNA Translation: CAB54297.2
BX284605 Genomic DNA Translation: CAD54154.1
BX284605 Genomic DNA Translation: CAD54155.2
BX284605 Genomic DNA Translation: CAD54156.2
BX284605 Genomic DNA Translation: CAJ80826.1
BX284605 Genomic DNA Translation: CCW45976.1
BX284605 Genomic DNA Translation: CUR30005.1

Protein sequence database of the Protein Information Resource

More...
PIRi
T23293
T23295
T23296

NCBI Reference Sequences

More...
RefSeqi
NP_001041165.1, NM_001047700.2 [G5EEK3-6]
NP_001294691.1, NM_001307762.1 [G5EEK3-7]
NP_001303706.1, NM_001316777.1 [G5EEK3-8]
NP_506274.1, NM_073873.1 [G5EEK3-9]
NP_506275.2, NM_073874.4 [G5EEK3-3]
NP_506276.2, NM_073875.4 [G5EEK3-2]
NP_872199.2, NM_182399.5 [G5EEK3-1]
NP_872200.1, NM_182400.4 [G5EEK3-4]
NP_872201.2, NM_182401.2 [G5EEK3-5]

Genome annotation databases

Ensembl metazoan genome annotation project

More...
EnsemblMetazoai
T09E8.1a.1; T09E8.1a.1; WBGene00011647 [G5EEK3-2]
T09E8.1b.1; T09E8.1b.1; WBGene00011647 [G5EEK3-3]
T09E8.1c.1; T09E8.1c.1; WBGene00011647 [G5EEK3-1]
T09E8.1d.1; T09E8.1d.1; WBGene00011647 [G5EEK3-4]
T09E8.1e.1; T09E8.1e.1; WBGene00011647 [G5EEK3-5]
T09E8.1f.1; T09E8.1f.1; WBGene00011647 [G5EEK3-6]
T09E8.1g.1; T09E8.1g.1; WBGene00011647 [G5EEK3-7]
T09E8.1h.1; T09E8.1h.1; WBGene00011647 [G5EEK3-8]
T09E8.1i.1; T09E8.1i.1; WBGene00011647 [G5EEK3-9]

Database of genes from NCBI RefSeq genomes

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GeneIDi
3565610

KEGG: Kyoto Encyclopedia of Genes and Genomes

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KEGGi
cel:CELE_T09E8.1

UCSC genome browser

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UCSCi
K03H4.2 c. elegans
T09E8.1c c. elegans

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KT722731 mRNA Translation: ALF12299.1
BX284605 Genomic DNA Translation: CAB03162.1
BX284605 Genomic DNA Translation: CAB54298.2
BX284605 Genomic DNA Translation: CAB54297.2
BX284605 Genomic DNA Translation: CAD54154.1
BX284605 Genomic DNA Translation: CAD54155.2
BX284605 Genomic DNA Translation: CAD54156.2
BX284605 Genomic DNA Translation: CAJ80826.1
BX284605 Genomic DNA Translation: CCW45976.1
BX284605 Genomic DNA Translation: CUR30005.1
PIRiT23293
T23295
T23296
RefSeqiNP_001041165.1, NM_001047700.2 [G5EEK3-6]
NP_001294691.1, NM_001307762.1 [G5EEK3-7]
NP_001303706.1, NM_001316777.1 [G5EEK3-8]
NP_506274.1, NM_073873.1 [G5EEK3-9]
NP_506275.2, NM_073874.4 [G5EEK3-3]
NP_506276.2, NM_073875.4 [G5EEK3-2]
NP_872199.2, NM_182399.5 [G5EEK3-1]
NP_872200.1, NM_182400.4 [G5EEK3-4]
NP_872201.2, NM_182401.2 [G5EEK3-5]

3D structure databases

SMRiG5EEK3
ModBaseiSearch...

Protein-protein interaction databases

IntActiG5EEK3, 3 interactors
STRINGi6239.T09E8.1c

Proteomic databases

EPDiG5EEK3
PaxDbiG5EEK3
PeptideAtlasiG5EEK3

Genome annotation databases

EnsemblMetazoaiT09E8.1a.1; T09E8.1a.1; WBGene00011647 [G5EEK3-2]
T09E8.1b.1; T09E8.1b.1; WBGene00011647 [G5EEK3-3]
T09E8.1c.1; T09E8.1c.1; WBGene00011647 [G5EEK3-1]
T09E8.1d.1; T09E8.1d.1; WBGene00011647 [G5EEK3-4]
T09E8.1e.1; T09E8.1e.1; WBGene00011647 [G5EEK3-5]
T09E8.1f.1; T09E8.1f.1; WBGene00011647 [G5EEK3-6]
T09E8.1g.1; T09E8.1g.1; WBGene00011647 [G5EEK3-7]
T09E8.1h.1; T09E8.1h.1; WBGene00011647 [G5EEK3-8]
T09E8.1i.1; T09E8.1i.1; WBGene00011647 [G5EEK3-9]
GeneIDi3565610
KEGGicel:CELE_T09E8.1
UCSCiK03H4.2 c. elegans
T09E8.1c c. elegans

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
3565610
WormBaseiT09E8.1a ; CE31987 ; WBGene00011647 ; noca-1
T09E8.1b ; CE31988 ; WBGene00011647 ; noca-1
T09E8.1c ; CE41451 ; WBGene00011647 ; noca-1
T09E8.1d ; CE31990 ; WBGene00011647 ; noca-1
T09E8.1e ; CE47381 ; WBGene00011647 ; noca-1
T09E8.1f ; CE39958 ; WBGene00011647 ; noca-1
T09E8.1g ; CE48378 ; WBGene00011647 ; noca-1
T09E8.1h ; CE51088 ; WBGene00011647 ; noca-1
T09E8.1i ; CE11698 ; WBGene00011647 ; noca-1

Phylogenomic databases

eggNOGiENOG410JM0P Eukaryota
ENOG410K8Q3 Eukaryota
ENOG4110K4V LUCA
ENOG41115WC LUCA
HOGENOMiHOG000018946
InParanoidiG5EEK3
OMAiQNRATPI
OrthoDBi1658778at2759

Miscellaneous databases

Protein Ontology

More...
PROi
PR:G5EEK3

Gene expression databases

BgeeiWBGene00011647 Expressed in 5 organ(s), highest expression level in pharyngeal muscle cell (C elegans)

Family and domain databases

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiNOCA1_CAEEL
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: G5EEK3
Secondary accession number(s): A0A0M3UPV7
, G5EBN2, G5EBP7, G5EC74, G5EE58, N1NSE8, Q8I4G1, Q9XVL5
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 11, 2016
Last sequence update: December 14, 2011
Last modified: September 18, 2019
This is version 60 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
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