UniProtKB - G5ECF7 (G5ECF7_CAEEL)
Protein
Submitted name:
GATA transcription factor ELT-3
Gene
elt-3
Organism
Caenorhabditis elegans
Status
Functioni
GO - Molecular functioni
- DNA-binding transcription factor activity, RNA polymerase II-specific Source: GO_Central
- RNA polymerase II cis-regulatory region sequence-specific DNA binding Source: GO_Central
- RNA polymerase II transcription regulatory region sequence-specific DNA binding Source: WormBase
- zinc ion binding Source: InterPro
GO - Biological processi
- cell fate commitment Source: GO_Central
- determination of adult lifespan Source: WormBase
- negative regulation of transcription by RNA polymerase II Source: GO_Central
- positive regulation of transcription by RNA polymerase II Source: WormBase
- regulation of transcription by RNA polymerase II Source: WormBase
Keywordsi
Biological process | Transcription, Transcription regulationARBA annotation |
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Submitted name: GATA transcription factor ELT-3ImportedSubmitted name: GATA-type domain-containing proteinImported |
Gene namesi | Name:elt-3Imported ORF Names:CELE_K02B9.4Imported, K02B9.4Imported |
Organismi | Caenorhabditis elegansImported |
Taxonomic identifieri | 6239 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditina › Rhabditomorpha › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis |
Proteomesi |
|
Organism-specific databases
WormBasei | K02B9.4a ; CE23844 ; WBGene00001251 ; elt-3 |
Subcellular locationi
Keywords - Cellular componenti
NucleusARBA annotationExpressioni
Gene expression databases
Bgeei | WBGene00001251, Expressed in multi-cellular organism and 5 other tissues |
ExpressionAtlasi | G5ECF7, baseline and differential |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 147 – 200 | GATA-typeInterPro annotationAdd BLAST | 54 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 199 – 226 | DisorderedSequence analysisAdd BLAST | 28 |
Keywords - Domaini
Zinc-fingerPROSITE-ProRule annotationARBA annotationPhylogenomic databases
OrthoDBi | 1295443at2759 |
Family and domain databases
CDDi | cd00202, ZnF_GATA, 1 hit |
Gene3Di | 3.30.50.10, 1 hit |
InterProi | View protein in InterPro IPR039355, Transcription_factor_GATA IPR000679, Znf_GATA IPR013088, Znf_NHR/GATA |
PANTHERi | PTHR10071, PTHR10071, 1 hit |
Pfami | View protein in Pfam PF00320, GATA, 1 hit |
PRINTSi | PR00619, GATAZNFINGER |
SMARTi | View protein in SMART SM00401, ZnF_GATA, 1 hit |
PROSITEi | View protein in PROSITE PS00344, GATA_ZN_FINGER_1, 1 hit PS50114, GATA_ZN_FINGER_2, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All
G5ECF7-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MKDSQLSVKP AAYYCSPTMN DYRVEKVANT LLDPYVQLDQ PTYADFTNAQ
60 70 80 90 100
VLNHQQEMLQ MNFPTPLSTS YMNTAQVTQT HQMPFNIFEL NLSNFATFQP
110 120 130 140 150
ACDTPLPLLN SSPTHPYTTM SNFTPPPQDP LVAEPKPMKK RMAAVQCHQN
160 170 180 190 200
SICSNCKTRE TTLWRRNGEG GVECNACNLY FRKNNRKRPL SLRKDGIMKR
210 220
NRRPRNESPN SAIRNTHQRH GHAAAC
Computationally mapped potential isoform sequencesi
There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketB7WN96 | B7WN96_CAEEL | GATA-type domain-containing protein | elt-3 CELE_K02B9.4, K02B9.4 | 317 | Annotation score: | ||
E5QCG7 | E5QCG7_CAEEL | GATA-type domain-containing protein | elt-3 CELE_K02B9.4, K02B9.4 | 208 | Annotation score: | ||
E5QCG8 | E5QCG8_CAEEL | GATA-type domain-containing protein | elt-3 CELE_K02B9.4, K02B9.4 | 169 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF146517 mRNA Translation: AAD33964.1 BX284606 Genomic DNA Translation: CAA93510.2 |
PIRi | C89697 T23233 |
RefSeqi | NP_001257235.1, NM_001270306.1 |
Genome annotation databases
EnsemblMetazoai | K02B9.4a.1; K02B9.4a.1; WBGene00001251 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF146517 mRNA Translation: AAD33964.1 BX284606 Genomic DNA Translation: CAA93510.2 |
PIRi | C89697 T23233 |
RefSeqi | NP_001257235.1, NM_001270306.1 |
3D structure databases
SMRi | G5ECF7 |
ModBasei | Search... |
Genome annotation databases
EnsemblMetazoai | K02B9.4a.1; K02B9.4a.1; WBGene00001251 |
Organism-specific databases
WormBasei | K02B9.4a ; CE23844 ; WBGene00001251 ; elt-3 |
Phylogenomic databases
OrthoDBi | 1295443at2759 |
Gene expression databases
Bgeei | WBGene00001251, Expressed in multi-cellular organism and 5 other tissues |
ExpressionAtlasi | G5ECF7, baseline and differential |
Family and domain databases
CDDi | cd00202, ZnF_GATA, 1 hit |
Gene3Di | 3.30.50.10, 1 hit |
InterProi | View protein in InterPro IPR039355, Transcription_factor_GATA IPR000679, Znf_GATA IPR013088, Znf_NHR/GATA |
PANTHERi | PTHR10071, PTHR10071, 1 hit |
Pfami | View protein in Pfam PF00320, GATA, 1 hit |
PRINTSi | PR00619, GATAZNFINGER |
SMARTi | View protein in SMART SM00401, ZnF_GATA, 1 hit |
PROSITEi | View protein in PROSITE PS00344, GATA_ZN_FINGER_1, 1 hit PS50114, GATA_ZN_FINGER_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | G5ECF7_CAEEL | |
Accessioni | G5ECF7Primary (citable) accession number: G5ECF7 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | December 14, 2011 |
Last sequence update: | December 14, 2011 | |
Last modified: | February 10, 2021 | |
This is version 87 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |