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Protein
Submitted name:

Semaphorin-3F

Gene

GW7_19938

Organism
Heterocephalus glaber (Naked mole rat)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Semaphorin-3FImported
Gene namesi
ORF Names:GW7_19938Imported
OrganismiHeterocephalus glaber (Naked mole rat)Imported
Taxonomic identifieri10181 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaHystricomorphaBathyergidaeHeterocephalus
Proteomesi
  • UP000006813 Componenti: Unassembled WGS sequence

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini29 – 543SemaInterPro annotationAdd BLAST515
Domaini617 – 688Ig-likeInterPro annotationAdd BLAST72

Sequence similaritiesi

Belongs to the semaphorin family.SAAS annotation

Phylogenomic databases

InParanoidiG5BZY3

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003599 Ig_sub
IPR003598 Ig_sub2
IPR016201 PSI
IPR001627 Semap_dom
IPR036352 Semap_dom_sf
IPR027231 Semaphorin
PANTHERiPTHR11036 PTHR11036, 1 hit
PfamiView protein in Pfam
PF01403 Sema, 1 hit
SMARTiView protein in SMART
SM00409 IG, 1 hit
SM00408 IGc2, 1 hit
SM00423 PSI, 1 hit
SM00630 Sema, 1 hit
SUPFAMiSSF101912 SSF101912, 1 hit
SSF48726 SSF48726, 1 hit
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 1 hit
PS51004 SEMA, 1 hit

Sequencei

Sequence statusi: Complete.

G5BZY3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTGWPSGGLR VAQQQVQNRC LSSPAQDFKS TAGQAELKAT GTAHFFNFLL
60 70 80 90 100
NTTDYRILLK DEDHDRMYVG SKDYVLSLDL HDINREPLII HWAASPQRIE
110 120 130 140 150
ECVLSGKDGN GECGNFIRLI QPWNRTHLYV CGTGAYNPMC TYVNRGRRAQ
160 170 180 190 200
AMPWTQAQVV RGRGSRATDG TVYPMPTAPR QDYIFYLEPE RLESGKGKCP
210 220 230 240 250
YDPKLDTASA LINEELYAGV YIDFMGTDAA IFRTLGKQTA MRTDQYNSRW
260 270 280 290 300
LNDPSFIHAE LIPDSAERND DKLYFFFRER SAETAQSPAV YARIGRICLN
310 320 330 340 350
DDGGHCCLVN KWSTFLKARL VCSVPGEDGI ETHFDELQDV FVQQTQDVRN
360 370 380 390 400
PVIYAVFTSS GSVFRGSAVC VYSMADIRMV FNGPFAHKEG PNYQWMPFSG
410 420 430 440 450
KMPYPRPGTC PGGTFTPSMK STKDYPDEVI NFMRSHPLMY QAVYPLQRRP
460 470 480 490 500
LVVRTGAPYR LTTVAVDQVD AADGRYEVLF LGTDRGTVQK VIVLPKDDQE
510 520 530 540 550
VEELMLEEVA VFKDPAPVKT MSISSKRQQL YVASAVGVTH LSLHRCHAYG
560 570 580 590 600
AACADCCLAR DPYCAWDGQA CSRYTASSKR RSRRQDVRHG NPIRQCRGFN
610 620 630 640 650
SNANKNAIES VQYGVAGSTA FLECQPRSPQ ATVKWLFQRD PGDRRREIRA
660 670 680 690 700
EERFLRTEQG LLLRALQLSD RGLYSCTATE NNFKHVVTRV QLHILGQDAV
710 720 730 740 750
HAALFPPLAV SVPPPPGTGP PTPPYQELAQ LLAQPEVGLI HQYCQGYWRH
760 770 780 790 800
VPPSPREAPG ALRPPEPQDQ KXXXXXXXXX XXXXXXXXXX XKISIFYIHS
810 820 830 840
APAKTVFIGG LYITCLTGSI FQNLDPCFLE MAENWARPGP HSPQV
Length:845
Mass (Da):94,709
Last modified:December 14, 2011 - v1
Checksum:i2E2256509E85ABEC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JH172617 Genomic DNA Translation: EHB14825.1

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JH172617 Genomic DNA Translation: EHB14825.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

InParanoidiG5BZY3

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003599 Ig_sub
IPR003598 Ig_sub2
IPR016201 PSI
IPR001627 Semap_dom
IPR036352 Semap_dom_sf
IPR027231 Semaphorin
PANTHERiPTHR11036 PTHR11036, 1 hit
PfamiView protein in Pfam
PF01403 Sema, 1 hit
SMARTiView protein in SMART
SM00409 IG, 1 hit
SM00408 IGc2, 1 hit
SM00423 PSI, 1 hit
SM00630 Sema, 1 hit
SUPFAMiSSF101912 SSF101912, 1 hit
SSF48726 SSF48726, 1 hit
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 1 hit
PS51004 SEMA, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiG5BZY3_HETGA
AccessioniPrimary (citable) accession number: G5BZY3
Entry historyiIntegrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: November 7, 2018
This is version 34 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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