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Entry version 76 (18 Sep 2019)
Sequence version 1 (16 Nov 2011)
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Protein
Submitted name:

Stabilin 1, isoform CRA_a

Gene

Stab1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Stabilin 1, isoform CRA_aImported
Submitted name:
Stabilin-1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Stab1Imported
ORF Names:mCG_145753Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 14

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2178742 Stab1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei2476 – 2499HelicalSequence analysisAdd BLAST24

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 25Sequence analysisAdd BLAST25
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_501509181826 – 2571Sequence analysisAdd BLAST2546

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the PTM / Processing":/help/ptm_processing_section section describes the positions of cysteine residues participating in disulfide bonds.<p><a href='/help/disulfid' target='_top'>More...</a></p>Disulfide bondi139 ↔ 148PROSITE-ProRule annotation
Disulfide bondi165 ↔ 182PROSITE-ProRule annotation
Disulfide bondi184 ↔ 193PROSITE-ProRule annotation
Disulfide bondi759 ↔ 768PROSITE-ProRule annotation
Disulfide bondi1359 ↔ 1368PROSITE-ProRule annotation
Disulfide bondi1384 ↔ 1401PROSITE-ProRule annotation
Disulfide bondi1403 ↔ 1412PROSITE-ProRule annotation
Disulfide bondi1421 ↔ 1431PROSITE-ProRule annotation
Disulfide bondi1997 ↔ 2006PROSITE-ProRule annotation
Disulfide bondi2041 ↔ 2050PROSITE-ProRule annotation
Disulfide bondi2060 ↔ 2070PROSITE-ProRule annotation
Disulfide bondi2230 ↔ 2299PROSITE-ProRule annotation
Disulfide bondi2254 ↔ 2275PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bondPROSITE-ProRule annotationSAAS annotation

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000042286 Expressed in 244 organ(s), highest expression level in bone marrow macrophage

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini111 – 149EGF-likeInterPro annotationAdd BLAST39
Domaini157 – 194EGF-likeInterPro annotationAdd BLAST38
Domaini196 – 232EGF-likeInterPro annotationAdd BLAST37
Domaini233 – 272EGF-likeInterPro annotationAdd BLAST40
Domaini357 – 495FAS1InterPro annotationAdd BLAST139
Domaini507 – 642FAS1InterPro annotationAdd BLAST136
Domaini729 – 769EGF-likeInterPro annotationAdd BLAST41
Domaini819 – 859EGF-likeInterPro annotationAdd BLAST41
Domaini862 – 904EGF-likeInterPro annotationAdd BLAST43
Domaini905 – 947EGF-likeInterPro annotationAdd BLAST43
Domaini948 – 987EGF-likeInterPro annotationAdd BLAST40
Domaini989 – 1119FAS1InterPro annotationAdd BLAST131
Domaini1129 – 1254FAS1InterPro annotationAdd BLAST126
Domaini1331 – 1369EGF-likeInterPro annotationAdd BLAST39
Domaini1376 – 1413EGF-likeInterPro annotationAdd BLAST38
Domaini1417 – 1455EGF-likeInterPro annotationAdd BLAST39
Domaini1456 – 1497EGF-likeInterPro annotationAdd BLAST42
Domaini1498 – 1540EGF-likeInterPro annotationAdd BLAST43
Domaini1541 – 1583EGF-likeInterPro annotationAdd BLAST43
Domaini1583 – 1709FAS1InterPro annotationAdd BLAST127
Domaini1725 – 1865FAS1InterPro annotationAdd BLAST141
Domaini1967 – 2007EGF-likeInterPro annotationAdd BLAST41
Domaini2014 – 2051EGF-likeInterPro annotationAdd BLAST38
Domaini2056 – 2090EGF-likeInterPro annotationAdd BLAST35
Domaini2091 – 2131EGF-likeInterPro annotationAdd BLAST41
Domaini2132 – 2174EGF-likeInterPro annotationAdd BLAST43
Domaini2208 – 2301LinkInterPro annotationAdd BLAST94
Domaini2322 – 2459FAS1InterPro annotationAdd BLAST138

Keywords - Domaini

EGF-like domainPROSITE-ProRule annotation, Laminin EGF-like domainSAAS annotation, RepeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1218 Eukaryota
ENOG410XQWV LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000157928

KEGG Orthology (KO)

More...
KOi
K19020

Identification of Orthologs from Complete Genome Data

More...
OMAi
KHGENCD

Database of Orthologous Groups

More...
OrthoDBi
6428at2759

TreeFam database of animal gene trees

More...
TreeFami
TF331489

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.30.180.10, 5 hits
3.10.100.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR016186 C-type_lectin-like/link_sf
IPR016187 CTDL_fold
IPR001881 EGF-like_Ca-bd_dom
IPR013032 EGF-like_CS
IPR000742 EGF-like_dom
IPR024731 EGF_dom
IPR036378 FAS1_dom_sf
IPR000782 FAS1_domain
IPR002049 Laminin_EGF
IPR000538 Link_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF12947 EGF_3, 5 hits
PF02469 Fasciclin, 4 hits
PF00193 Xlink, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00181 EGF, 23 hits
SM00179 EGF_CA, 7 hits
SM00180 EGF_Lam, 4 hits
SM00554 FAS1, 6 hits
SM00445 LINK, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF56436 SSF56436, 1 hit
SSF82153 SSF82153, 7 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00022 EGF_1, 7 hits
PS01186 EGF_2, 11 hits
PS50026 EGF_3, 20 hits
PS50213 FAS1, 7 hits
PS01241 LINK_1, 1 hit
PS50963 LINK_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

G3X973-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAEPRTLLLL CVLVLCLSDS SFIRGQTVRS KRCDIHTKFV THTPCTACAA
60 70 80 90 100
IRRQLCPWGW SRNFPEKILL DCRYELQLRG AAISLSGCSQ ECWKDVVQKA
110 120 130 140 150
CCPGYWGSQC FECPGGPATP CSGHGTCLDG IEGNGTCVCQ ENFSGSVCQE
160 170 180 190 200
CRDPNRFGPD CQSVCNCVHG VCSHGPRGDG SCRCFAGYTG PHCDQELPVC
210 220 230 240 250
QSLKCPQNSQ CSAEAPTCKC LPGYTQQDNV CLAPDPCQPS ACSPLARCSV
260 270 280 290 300
TPQGQAQCQC PENYHGDGKV CLPRDPCLTN FGGCPSNSTF CLYRGPGKAT
310 320 330 340 350
CMCRPGMTSI NNNASEGCHV SCKPHSCDRS ATCQVTPDRK TSCVCKNDEV
360 370 380 390 400
GDGHACYGHL LHEVRRANQN GLVFLRLRAA IAMLEQGCQE ILTTSGPFTV
410 420 430 440 450
LVPSMFSVSS VSSNMNATLA QQLCRQHVIA GEHMLENAGP PSTRRWWTLA
460 470 480 490 500
GQEVTITFKN MRYAYKYEDQ PQQFSIHKAN YIAANGVFHT VTALRWQLPP
510 520 530 540 550
PLPGDSKKTV GQILASTEVF TRFETILENC GLPSILDGPG PFTVFAPSNE
560 570 580 590 600
AVDSLRDGRL IYLFTAGLSK LQELVRYHIY NHGQLTVEKL ISKGRVLTMA
610 620 630 640 650
NQVLTVNISE EGRILLGPEG IPVRRVDVPA ANGVIHMLEG ILLPPTILPI
660 670 680 690 700
LPKHCDEEQH QTVLGSCVDC QALNTSVCPP NSVKMDIFPK ECVYIHDPNG
710 720 730 740 750
LNVLKKGCAD YCNQTITKRG CCKGFFGPDC TQCPGGFSNP CYGKGNCSDG
760 770 780 790 800
VRGNGACLCF PDYKGIACHI CSDPKKHGEQ CQEDCGCVHG LCDNRPGSGG
810 820 830 840 850
VCQQGTCAPG FQGRFCNESM GNCGSTGLAQ PCHSDAHCVI QEGVARCVCH
860 870 880 890 900
DGFEGNGFSC KRSNPCSRPD RGGCSENAEC VPGDLGTHHC ICHKGWSGDG
910 920 930 940 950
RICVAIDECG LDTRGGCHAD ALCSYVGPGQ SRCTCKLGFA GNGYECSPID
960 970 980 990 1000
PCRVGNGGCH GLATCKAVGG GQRVCTCPPH FGGDGFSCYG DIIQELEANA
1010 1020 1030 1040 1050
HFSAFSQWFK NSSITLPADS RVTALVPSES AIRRLSLEDQ AFWLQPKMLP
1060 1070 1080 1090 1100
ELARAHFLQG AFSEEELARL NGQQVATLSA TTRWQIHNIS GKVWVQNATV
1110 1120 1130 1140 1150
DVPDLLATNG ILHIVSQVLL PPRGDMQTGP GLLQQLDSVP AFRLFGEQLK
1160 1170 1180 1190 1200
HHKLVAQIEA AKAYTIFVPT NHSLETQGNN SVLGIDTVRH HVILGEALSV
1210 1220 1230 1240 1250
EVLRKGGHRN SLLGPAHWLV FYNHSGQPEV NHMPLEGPLL EAPGSSLFGL
1260 1270 1280 1290 1300
SGILAVGSSR CLHSHAEALR EKCINCTRKF RCTQGFQLQD TPRKSCVYRS
1310 1320 1330 1340 1350
GLSFSRGCSY TCAKKIQVPD CCPGFFGTLC EPCPGGLGGV CSGHGQCQDR
1360 1370 1380 1390 1400
FLGNGECRCQ EGFHGTACEM CELGRYGPTC SGVCDCDHGL CQEGLRGNGS
1410 1420 1430 1440 1450
CVCHAGWQGL RCDQKITDHQ CPKKCDPNAN CIQDSAGIPA CVCAAGYSGN
1460 1470 1480 1490 1500
GSYCSEVDPC ASGHGGCSPY ANCTKVAPGQ RTCTCQDGYT GDGELCQEIN
1510 1520 1530 1540 1550
SCLVHNGGCH VHAECIPTGP QQVSCSCREG YSGDGIQTCK LLDPCSQNNG
1560 1570 1580 1590 1600
GCSPYAVCKS TGDGQRTCSC DATHTVGDGI TCHGRVGLEL LRNKYASFFS
1610 1620 1630 1640 1650
LHLLEYKELK GDGPFTVFVP HADLISNMSQ DELARIRAHR QLVFRYHVVG
1660 1670 1680 1690 1700
CRKLWSQEML DQGYITTLSG HTLRVSEREG SIYLNDFARV VSSDLEVVNG
1710 1720 1730 1740 1750
VLHFIDHVLL PPDVLHWESG AIPIPQRNVT AAAESFGYKI FSRLLTVAGL
1760 1770 1780 1790 1800
LPMLQDASHR PFTMLWPTDS ALQALPPDRK NWLFHEDHRD KLAAILRGHM
1810 1820 1830 1840 1850
IRNIEALASD LPNLGQLRTM HGNTISFSCG LTRPGELIVG EDEAHIVQRH
1860 1870 1880 1890 1900
LTFEGGLAYG IDQLLEPPDL GARCDRFEPQ PLQMKTCSIC GLEPPCPRGS
1910 1920 1930 1940 1950
REQGSPETCW RHYSKFWTTP LHSISMRGAY WIPSSFWNRN HMSRGCHRNC
1960 1970 1980 1990 2000
VTTVWKPSCC PGHYGINCHA CPGGPRSPCS DHGVCLDGIR GSGQCNCHPG
2010 2020 2030 2040 2050
FAGTACELCA PGAFGPQCQA CRCTQHGRCD EGLGGSGSCF CDEGWTGARC
2060 2070 2080 2090 2100
EVQLELQPVC TPPCAPQAVC RLGNSCECSL GYEGDGRVCT VADLCQKGHG
2110 2120 2130 2140 2150
GCSKHANCSQ VGTVVTCTCL PDYEGDGWSC RARDPCLDGH RGGCSEHADC
2160 2170 2180 2190 2200
LNTGPNTRRC ECHVGYVGDG LQCLEELEPP VDRCLGGSSP CHTDALCTDL
2210 2220 2230 2240 2250
HFQEKQAGVF HIQATSGPYG LTFSEAKEAC EGQGAVLASL PQLSAAQQLG
2260 2270 2280 2290 2300
FHVCFVGWLA NGSAAHPVVT PAADCGNNRV GVVSLGVRKN LSELWDAYCY
2310 2320 2330 2340 2350
RVQDVACQCR AGFVGDGIST CNGKLLDVLA ATANFSTFYG MLLGYANATQ
2360 2370 2380 2390 2400
RGLEFMDFLE DELTYKTLFV PVNKGFVDNM TLSGPDLELH ASNATFLSIN
2410 2420 2430 2440 2450
ASRGTLLPAH SGLSLFISDT GPDNTSLVPL APGAVVVSHV IVWDIMAFNG
2460 2470 2480 2490 2500
IIHALASPLL MPPQTRAVLG SEPPPVALSL GVVVTSGTLL GLVAGALYLR
2510 2520 2530 2540 2550
ARGKPPGFSF SAFQAEDNAD DDFSPWQEGT SPTLVSVPNP VFGSSDIFCE
2560 2570
PFDDSVLEED FPDTQRVLKV K
Length:2,571
Mass (Da):276,473
Last modified:November 16, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iD55BB6C4B82A91AD
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q8R4Y4STAB1_MOUSE
Stabilin-1
Stab1 Feel1
2,571Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F7BK35F7BK35_MOUSE
Stabilin-1
Stab1
197Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F7CT68F7CT68_MOUSE
Stabilin-1
Stab1
92Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AC154446 Genomic DNA No translation available.
CH466573 Genomic DNA Translation: EDL24792.1

NCBI Reference Sequences

More...
RefSeqi
NP_619613.2, NM_138672.2

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000036618; ENSMUSP00000046199; ENSMUSG00000042286

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
192187

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:192187

UCSC genome browser

More...
UCSCi
uc007swv.1 mouse

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC154446 Genomic DNA No translation available.
CH466573 Genomic DNA Translation: EDL24792.1
RefSeqiNP_619613.2, NM_138672.2

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000036618; ENSMUSP00000046199; ENSMUSG00000042286
GeneIDi192187
KEGGimmu:192187
UCSCiuc007swv.1 mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
23166
MGIiMGI:2178742 Stab1

Phylogenomic databases

eggNOGiKOG1218 Eukaryota
ENOG410XQWV LUCA
GeneTreeiENSGT00940000157928
KOiK19020
OMAiKHGENCD
OrthoDBi6428at2759
TreeFamiTF331489

Miscellaneous databases

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000042286 Expressed in 244 organ(s), highest expression level in bone marrow macrophage

Family and domain databases

Gene3Di2.30.180.10, 5 hits
3.10.100.10, 1 hit
InterProiView protein in InterPro
IPR016186 C-type_lectin-like/link_sf
IPR016187 CTDL_fold
IPR001881 EGF-like_Ca-bd_dom
IPR013032 EGF-like_CS
IPR000742 EGF-like_dom
IPR024731 EGF_dom
IPR036378 FAS1_dom_sf
IPR000782 FAS1_domain
IPR002049 Laminin_EGF
IPR000538 Link_dom
PfamiView protein in Pfam
PF12947 EGF_3, 5 hits
PF02469 Fasciclin, 4 hits
PF00193 Xlink, 1 hit
SMARTiView protein in SMART
SM00181 EGF, 23 hits
SM00179 EGF_CA, 7 hits
SM00180 EGF_Lam, 4 hits
SM00554 FAS1, 6 hits
SM00445 LINK, 1 hit
SUPFAMiSSF56436 SSF56436, 1 hit
SSF82153 SSF82153, 7 hits
PROSITEiView protein in PROSITE
PS00022 EGF_1, 7 hits
PS01186 EGF_2, 11 hits
PS50026 EGF_3, 20 hits
PS50213 FAS1, 7 hits
PS01241 LINK_1, 1 hit
PS50963 LINK_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiG3X973_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: G3X973
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: September 18, 2019
This is version 76 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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