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Protein
Submitted name:

MCG20985, isoform CRA_a

Gene

Zkscan2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
MCG20985, isoform CRA_aImported
Submitted name:
Zinc finger with KRAB and SCAN domains 2Imported
Gene namesi
Name:Zkscan2Imported
ORF Names:mCG_20985Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:2444060 Zkscan2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Expressioni

Gene expression databases

BgeeiENSMUSG00000030757 Expressed in 144 organ(s), highest expression level in head

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000041821

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini45 – 126SCAN boxInterPro annotationAdd BLAST82
Domaini222 – 293KRABInterPro annotationAdd BLAST72
Domaini768 – 795C2H2-typeInterPro annotationAdd BLAST28
Domaini796 – 823C2H2-typeInterPro annotationAdd BLAST28
Domaini824 – 851C2H2-typeInterPro annotationAdd BLAST28
Domaini852 – 879C2H2-typeInterPro annotationAdd BLAST28
Domaini880 – 907C2H2-typeInterPro annotationAdd BLAST28
Domaini908 – 935C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

RepeatSAAS annotation, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00530000063287
KOiK09229
OMAiKIQAWAQ
OrthoDBiEOG091G02KC
TreeFamiTF336839

Family and domain databases

CDDicd07936 SCAN, 1 hit
Gene3Di1.10.4020.10, 1 hit
InterProiView protein in InterPro
IPR001909 KRAB
IPR003309 SCAN_dom
IPR038269 SCAN_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF02023 SCAN, 1 hit
PF00096 zf-C2H2, 6 hits
SMARTiView protein in SMART
SM00431 SCAN, 1 hit
SM00355 ZnF_C2H2, 6 hits
SUPFAMiSSF57667 SSF57667, 4 hits
PROSITEiView protein in PROSITE
PS50805 KRAB, 1 hit
PS50804 SCAN_BOX, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 6 hits
PS50157 ZINC_FINGER_C2H2_2, 6 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

G3X952-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MATVMNPQID VEVEECLIMK VEKDSEWVSE PILERSGSTE CESFRKCFRQ
60 70 80 90 100
FCYEDVTGPH EAFSKLWELC CRWLKPEMRS KEQILEQLVI EQFLTILPEK
110 120 130 140 150
IQTWAQKQCP ESGEEAVALV VHLEKETRRL RKQVSSPLPS EKQAPPRTVW
160 170 180 190 200
EVADFEPEQL ETQHRVVSLE EAGSLHSGHQ EQLNQKREHR PLPKNAHSSV
210 220 230 240 250
WVPVPSDEWN ALDEEVTTQE PIRDVHTERS FSYKKSVQQV PAHRGLYHEI
260 270 280 290 300
RKESAGSMVS LGDSVSAPNK IAQLEQKKEP WSVGLHSSNK RNSVLQSNYI
310 320 330 340 350
KEKSVHAVQI PARNAGKVWR EQQQWGLEDE KIAGVHWSYE ETKTFLAILK
360 370 380 390 400
ESRFYETLQA CPRNSQVYGA VAEWLRECGF LRTPEQCRTK FKSLQKSYRK
410 420 430 440 450
VRNGHMLEPC AFFEDMDALL NPAAHTSSTE RPKVVISLPL KRTAISAKEQ
460 470 480 490 500
VSLVEEEEGA EDSDGDEVGI EFIRKSEIRA APVLFQNLSG VHWGYEETKT
510 520 530 540 550
FLDILQETRF YEALQACHRK SKLYGVVAEQ LRECGFLRTP EQCRTKFKSL
560 570 580 590 600
QKSYRKVKNG HVLESCAFYK EMDALVNCRP SSLSTNTSEE VPSLSRQERG
610 620 630 640 650
HIEVEPREPT TWEPVETPQE AVLEDSGSER LSEEEMIEEP ELEGPSGLLQ
660 670 680 690 700
SPAGFEIGTI IKEDPTQVMF KDTEPHRVLM EKPKRLVSQN TNPSKYCKRE
710 720 730 740 750
YFSGRHCENL QGVRQGKLMS QPRDTGKAVV HQRPCVGRRP YRLLKYGENF
760 770 780 790 800
GRSARLVCRM THQKENPFKC GVCGKCFGRS RSLIRHQRIH TGEKPFKCPD
810 820 830 840 850
CGKSFNDSSN FGAHQRVHTG EKPYRCRECG KCFSQSSSLI IHQRTHTGEK
860 870 880 890 900
PYQCEECGKS FTNSSHFSAH RRIHTEENPY KCGDCEKSFN NCARFREHQR
910 920 930 940 950
IHNGEKPYTC AQCGKHFNKS SFLTKHREVH MREKLLPYSP SVYSPENLLK
960
GKSAELRKTF
Length:960
Mass (Da):110,492
Last modified:November 16, 2011 - v1
Checksum:iD2D91ADA85F180B9
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
G3UZ80G3UZ80_MOUSE
MCG20985, isoform CRA_b
Zkscan2 mCG_20985
271Annotation score:
F7BPE8F7BPE8_MOUSE
Zinc finger with KRAB and SCAN doma...
Zkscan2
42Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC117184 Genomic DNA No translation available.
CH466531 Genomic DNA Translation: EDL17312.1
RefSeqiNP_001074798.1, NM_001081329.1
UniGeneiMm.135397

Genome annotation databases

EnsembliENSMUST00000042470; ENSMUSP00000041821; ENSMUSG00000030757
GeneIDi210162
KEGGimmu:210162
UCSCiuc009jps.2 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC117184 Genomic DNA No translation available.
CH466531 Genomic DNA Translation: EDL17312.1
RefSeqiNP_001074798.1, NM_001081329.1
UniGeneiMm.135397

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000041821

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000042470; ENSMUSP00000041821; ENSMUSG00000030757
GeneIDi210162
KEGGimmu:210162
UCSCiuc009jps.2 mouse

Organism-specific databases

CTDi342357
MGIiMGI:2444060 Zkscan2

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00530000063287
KOiK09229
OMAiKIQAWAQ
OrthoDBiEOG091G02KC
TreeFamiTF336839

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000030757 Expressed in 144 organ(s), highest expression level in head

Family and domain databases

CDDicd07936 SCAN, 1 hit
Gene3Di1.10.4020.10, 1 hit
InterProiView protein in InterPro
IPR001909 KRAB
IPR003309 SCAN_dom
IPR038269 SCAN_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF02023 SCAN, 1 hit
PF00096 zf-C2H2, 6 hits
SMARTiView protein in SMART
SM00431 SCAN, 1 hit
SM00355 ZnF_C2H2, 6 hits
SUPFAMiSSF57667 SSF57667, 4 hits
PROSITEiView protein in PROSITE
PS50805 KRAB, 1 hit
PS50804 SCAN_BOX, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 6 hits
PS50157 ZINC_FINGER_C2H2_2, 6 hits
ProtoNetiSearch...

Entry informationi

Entry nameiG3X952_MOUSE
AccessioniPrimary (citable) accession number: G3X952
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: October 10, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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