UniProtKB - G3VLN5 (G3VLN5_SARHA)
Protein
C2H2-type domain-containing protein
Gene
ATMIN
Organism
Sarcophilus harrisii (Tasmanian devil) (Sarcophilus laniarius)
Status
Functioni
GO - Molecular functioni
- DNA-binding transcription activator activity, RNA polymerase II-specific Source: Ensembl
- dynein complex binding Source: Ensembl
- transcription regulatory region sequence-specific DNA binding Source: Ensembl
GO - Biological processi
- motile cilium assembly Source: Ensembl
- positive regulation of non-motile cilium assembly Source: Ensembl
Names & Taxonomyi
Protein namesi | Recommended name: C2H2-type domain-containing proteinInterPro annotation |
Gene namesi | Name:ATMINImported |
Organismi | Sarcophilus harrisii (Tasmanian devil) (Sarcophilus laniarius)Imported |
Taxonomic identifieri | 9305 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Metatheria › Dasyuromorphia › Dasyuridae › Sarcophilus |
Proteomesi |
|
Subcellular locationi
Nucleus
- nuclear body Source: Ensembl
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 95 – 118 | C2H2-typeInterPro annotationAdd BLAST | 24 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 19 – 38 | DisorderedSequence analysisAdd BLAST | 20 | |
Regioni | 224 – 243 | DisorderedSequence analysisAdd BLAST | 20 | |
Regioni | 616 – 639 | DisorderedSequence analysisAdd BLAST | 24 | |
Regioni | 740 – 762 | DisorderedSequence analysisAdd BLAST | 23 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 740 – 755 | PolarSequence analysisAdd BLAST | 16 |
Phylogenomic databases
eggNOGi | KOG1721, Eukaryota |
GeneTreei | ENSGT00390000013091 |
HOGENOMi | CLU_023902_0_0_1 |
InParanoidi | G3VLN5 |
OMAi | DIQTQTD |
OrthoDBi | 583153at2759 |
TreeFami | TF331171 |
Family and domain databases
InterProi | View protein in InterPro IPR013087, Znf_C2H2_type |
SMARTi | View protein in SMART SM00355, ZnF_C2H2, 4 hits |
PROSITEi | View protein in PROSITE PS00028, ZINC_FINGER_C2H2_1, 1 hit |
i Sequence
Sequence statusi: Complete.
G3VLN5-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAAADAAAPS AVLAPAPLLA PVPDPAATRN SREDAATYAT SSRWGLGAGL
60 70 80 90 100
RGSRARMAGG KRQSSIATPN PVLAGELIRP SVSELSRAVR TNILCTVRGC
110 120 130 140 150
GKILPNGPAL NMHLVKSHRL QDGIINPTVR KDLKTTPKFY CCPIKGCPRG
160 170 180 190 200
PDRPFSQFSL VKQHFMKMHA EKKHKCDKCS NSYGTEWDLK RHAEDCGKIF
210 220 230 240 250
QCTCGCPYAS RTALQSHIYR TGHEIPAEHR DPPGKKRKME NSLHNQQLSD
260 270 280 290 300
KALESLINKP TTRTDTQDLE TSEIKLVASF EDSCSSNARK QTLTPPRYTP
310 320 330 340 350
KLLLPKPKVA LVKLPVMQFS HLPIFVPAAD SSVQPMVVGV DNQGSVTNTV
360 370 380 390 400
HLLPLSIGTL ILGLDSEGFS LKEGLPLSKI VNPVAVEPIS TGVQVNLGKN
410 420 430 440 450
STNALQELEN MCQKNKISSI NVQTDVSYTS QTLMSSSPWA PPDSSVSSCS
460 470 480 490 500
QTDLTFGSQV SLPISVQTQT FLPCTKITSS IAAQTDTFTH ACLQPCGISR
510 520 530 540 550
ETQTSGIQSS ADATMSVNQT VMCNDIFENV HSYNVSTPDI ANNSLVTAPV
560 570 580 590 600
SHSLLPHEGC KNLRQDSVKS TPVMNFSTQN NILPSQNMTD NQTQTIDLLN
610 620 630 640 650
DLENILSGSL PGQTLDSRSL LSDSNTGADT QLSSGSTQNP GIDFDIEEFF
660 670 680 690 700
SASNIQTQTE ESDLSNINTE PVLESLDIET QTDFLLADST TQSYSCKGNS
710 720 730 740 750
NFLGLEMFDT QTQTDLNFFL DTSPHLPLAN ILKHSSFSVS TDSSDTETQT
760 770 780 790 800
EGLSADKNVP GLGKVQLNST ETQTMNSGFE SLGNLFFTSN ETQTAMDDFL
810 820 830
LADLAWNTME SQFSSVETQT CAELCSVSNF
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AEFK01025625 Genomic DNA No translation available. |
RefSeqi | XP_003757895.1, XM_003757847.2 |
Genome annotation databases
Ensembli | ENSSHAT00000004131; ENSSHAP00000004090; ENSSHAG00000003606 |
GeneIDi | 100918428 |
KEGGi | shr:100918428 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AEFK01025625 Genomic DNA No translation available. |
RefSeqi | XP_003757895.1, XM_003757847.2 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 9305.ENSSHAP00000004090 |
Genome annotation databases
Ensembli | ENSSHAT00000004131; ENSSHAP00000004090; ENSSHAG00000003606 |
GeneIDi | 100918428 |
KEGGi | shr:100918428 |
Organism-specific databases
CTDi | 23300 |
Phylogenomic databases
eggNOGi | KOG1721, Eukaryota |
GeneTreei | ENSGT00390000013091 |
HOGENOMi | CLU_023902_0_0_1 |
InParanoidi | G3VLN5 |
OMAi | DIQTQTD |
OrthoDBi | 583153at2759 |
TreeFami | TF331171 |
Family and domain databases
InterProi | View protein in InterPro IPR013087, Znf_C2H2_type |
SMARTi | View protein in SMART SM00355, ZnF_C2H2, 4 hits |
PROSITEi | View protein in PROSITE PS00028, ZINC_FINGER_C2H2_1, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | G3VLN5_SARHA | |
Accessioni | G3VLN5Primary (citable) accession number: G3VLN5 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | November 16, 2011 |
Last sequence update: | November 16, 2011 | |
Last modified: | October 7, 2020 | |
This is version 47 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |