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Protein
Submitted name:

Oligodendrocyte transcription factor 2

Gene

Olig2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Oligodendrocyte transcription factor 2Imported
Submitted name:
RCG58659Imported
Gene namesi
Name:Olig2Imported
ORF Names:rCG_58659Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 11

Organism-specific databases

RGDi1307098 Olig2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiG3V612

Expressioni

Gene expression databases

BgeeiENSRNOG00000028658 Expressed in 1 organ(s), highest expression level in brain

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
Smarca4Q8K1P72EBI-6676662,EBI-689301

GO - Molecular functioni

Protein-protein interaction databases

IntActiG3V612, 1 interactor
STRINGi10116.ENSRNOP00000000325

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini108 – 162BHLHInterPro annotationAdd BLAST55

Phylogenomic databases

eggNOGiKOG3898 Eukaryota
ENOG4111U26 LUCA
GeneTreeiENSGT00530000063239
KOiK09085
OMAiPSACGTM
OrthoDBiEOG091G129L
TreeFamiTF322733

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR032658 Olig2
PANTHERiPTHR19290:SF32 PTHR19290:SF32, 1 hit
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit

Sequencei

Sequence statusi: Complete.

G3V612-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDSDASLVSS RPSSPEPDDL FLPARSKGGS SSGFTGGTVS SSTPSDCPPE
60 70 80 90 100
LSSELRGAMG TAGAHPGDKL GGGGFKSSSS STSSSTSSAA TSSTKKDKKQ
110 120 130 140 150
MTEPELQQLR LKINSRERKR MHDLNIAMDG LREVMPYAHG PSVRKLSKIA
160 170 180 190 200
TLLLARNYIL MLTNSLEEMK RLVSEIYGGH HAGFHPSACG GLAHSTPLPT
210 220 230 240 250
ATAHPAAAAH AAHHPAVHHP ILPPAAAAAA AAAAAAAVSS ASLPGSGLSS
260 270 280 290 300
VGSIRPPHGL LKSPSAAAAA PLGGGGGGSG GSGGFQHWGG MPCPCSMCQV
310 320
PPPHHHVSAM GAGTLPRLTS DAK
Length:323
Mass (Da):32,451
Last modified:November 16, 2011 - v1
Checksum:iED9E478C0508C18E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC112633 Genomic DNA No translation available.
CH473989 Genomic DNA Translation: EDM10712.1
RefSeqiNP_001094027.1, NM_001100557.1
UniGeneiRn.22121

Genome annotation databases

EnsembliENSRNOT00000000325; ENSRNOP00000000325; ENSRNOG00000028658
GeneIDi304103
KEGGirno:304103

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC112633 Genomic DNA No translation available.
CH473989 Genomic DNA Translation: EDM10712.1
RefSeqiNP_001094027.1, NM_001100557.1
UniGeneiRn.22121

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiG3V612, 1 interactor
STRINGi10116.ENSRNOP00000000325

Proteomic databases

PRIDEiG3V612

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000000325; ENSRNOP00000000325; ENSRNOG00000028658
GeneIDi304103
KEGGirno:304103

Organism-specific databases

CTDi10215
RGDi1307098 Olig2

Phylogenomic databases

eggNOGiKOG3898 Eukaryota
ENOG4111U26 LUCA
GeneTreeiENSGT00530000063239
KOiK09085
OMAiPSACGTM
OrthoDBiEOG091G129L
TreeFamiTF322733

Gene expression databases

BgeeiENSRNOG00000028658 Expressed in 1 organ(s), highest expression level in brain

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR032658 Olig2
PANTHERiPTHR19290:SF32 PTHR19290:SF32, 1 hit
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiG3V612_RAT
AccessioniPrimary (citable) accession number: G3V612
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: November 7, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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