Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Zinc finger and SCAN domain-containing protein 21

Gene

ZSCAN21

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

Biological processTranscription, Transcription regulationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger and SCAN domain-containing protein 21Imported
Gene namesi
Name:ZSCAN21Imported
Synonyms:DKFZp686H10254Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 7

Organism-specific databases

EuPathDBiHostDB:ENSG00000166529.14
HGNCiHGNC:13104 ZSCAN21

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000166529

PTM / Processingi

Proteomic databases

PRIDEiG3V1M0

Expressioni

Gene expression databases

BgeeiENSG00000166529 Expressed in 180 organ(s), highest expression level in oocyte

Interactioni

Protein-protein interaction databases

IntActiG3V1M0, 4 interactors

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini45 – 92SCAN boxInterPro annotationAdd BLAST48
Domaini240 – 267C2H2-typeInterPro annotationAdd BLAST28
Domaini268 – 295C2H2-typeInterPro annotationAdd BLAST28
Domaini296 – 322C2H2-typeInterPro annotationAdd BLAST27
Domaini323 – 350C2H2-typeInterPro annotationAdd BLAST28
Domaini351 – 378C2H2-typeInterPro annotationAdd BLAST28
Domaini379 – 406C2H2-typeInterPro annotationAdd BLAST28
Domaini407 – 434C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

RepeatSAAS annotation, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00760000118881
HOVERGENiHBG018163

Family and domain databases

CDDicd07936 SCAN, 1 hit
Gene3Di1.10.4020.10, 1 hit
InterProiView protein in InterPro
IPR003309 SCAN_dom
IPR038269 SCAN_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF02023 SCAN, 1 hit
PF00096 zf-C2H2, 7 hits
SMARTiView protein in SMART
SM00431 SCAN, 1 hit
SM00355 ZnF_C2H2, 7 hits
SUPFAMiSSF57667 SSF57667, 4 hits
PROSITEiView protein in PROSITE
PS50804 SCAN_BOX, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 6 hits
PS50157 ZINC_FINGER_C2H2_2, 7 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

G3V1M0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MMTKVLGMAP VLGPRPPQEQ VGPLMVKVEE KEEKGKYLPS LEMFRQRFRQ
60 70 80 90 100
FGYHDTPGPR EALSQLRVLC CEWLRPEIHT KEQILELLVL DEPGHQVSTP
110 120 130 140 150
PNEQKPVWEK ISSSGTAKES PSSMQPQPLE TSHKYESWGP LYIQESGEEQ
160 170 180 190 200
EFAQDPRKVR DCRLSTQHEE SADEQKGSEA EGLKGDIISV IIANKPEASL
210 220 230 240 250
ERQCVNLENE KGTKPPLQEA GSKKGRESVP TKPTPGERRY ICAECGKAFS
260 270 280 290 300
NSSNLTKHRR THTGEKPYVC TKCGKAFSHS SNLTLHYRTH LVDRPYDCKC
310 320 330 340 350
GKAFGQSSDL LKHQRMHTEE APYQCKDCGK AFSGKGSLIR HYRIHTGEKP
360 370 380 390 400
YQCNECGKSF SQHAGLSSHQ RLHTGEKPYK CKECGKAFNH SSNFNKHHRI
410 420 430
HTGEKPYWCH HCGKTFCSKS NLSKHQRVHT GEGEAP
Length:436
Mass (Da):49,339
Last modified:October 29, 2014 - v2
Checksum:i1216D9BF55636492
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q9Y5A6ZSC21_HUMAN
Zinc finger and SCAN domain-contain...
ZSCAN21 ZFP38, ZNF38
473Annotation score:
G3V0F4G3V0F4_HUMAN
Zinc finger and SCAN domain-contain...
ZSCAN21 ZNF38, hCG_1641359
450Annotation score:
C9JHD9C9JHD9_HUMAN
Zinc finger and SCAN domain-contain...
ZSCAN21
181Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC093619 Genomic DNA No translation available.
CR749301 mRNA Translation: CAH18156.1
UniGeneiHs.632294

Genome annotation databases

EnsembliENST00000543588; ENSP00000441212; ENSG00000166529
UCSCiuc064fyc.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC093619 Genomic DNA No translation available.
CR749301 mRNA Translation: CAH18156.1
UniGeneiHs.632294

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiG3V1M0, 4 interactors

Proteomic databases

PRIDEiG3V1M0

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000543588; ENSP00000441212; ENSG00000166529
UCSCiuc064fyc.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000166529.14
HGNCiHGNC:13104 ZSCAN21
OpenTargetsiENSG00000166529
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00760000118881
HOVERGENiHBG018163

Gene expression databases

BgeeiENSG00000166529 Expressed in 180 organ(s), highest expression level in oocyte

Family and domain databases

CDDicd07936 SCAN, 1 hit
Gene3Di1.10.4020.10, 1 hit
InterProiView protein in InterPro
IPR003309 SCAN_dom
IPR038269 SCAN_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF02023 SCAN, 1 hit
PF00096 zf-C2H2, 7 hits
SMARTiView protein in SMART
SM00431 SCAN, 1 hit
SM00355 ZnF_C2H2, 7 hits
SUPFAMiSSF57667 SSF57667, 4 hits
PROSITEiView protein in PROSITE
PS50804 SCAN_BOX, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 6 hits
PS50157 ZINC_FINGER_C2H2_2, 7 hits
ProtoNetiSearch...

Entry informationi

Entry nameiG3V1M0_HUMAN
AccessioniPrimary (citable) accession number: G3V1M0
Secondary accession number(s): Q68DR4
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: October 29, 2014
Last modified: November 7, 2018
This is version 74 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again