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Entry version 47 (03 Jul 2019)
Sequence version 2 (28 Feb 2018)
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Protein
Submitted name:

Apolipoprotein B

Gene

APOB

Organism
Gorilla gorilla gorilla (Western lowland gorilla)
Status
Unreviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Apolipoprotein BImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:APOBImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiGorilla gorilla gorilla (Western lowland gorilla)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9595 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeGorilla
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001519 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 2A

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 26Sequence analysisAdd BLAST26
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_501412587227 – 4566Sequence analysisAdd BLAST4540

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSGGOG00000005179 Expressed in 5 organ(s), highest expression level in liver

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
9593.ENSGGOP00000020316

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini49 – 675VitellogeninInterPro annotationAdd BLAST627

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili604 – 624Sequence analysisAdd BLAST21
Coiled coili2138 – 2158Sequence analysisAdd BLAST21
Coiled coili2262 – 2282Sequence analysisAdd BLAST21
Coiled coili4144 – 4164Sequence analysisAdd BLAST21
Coiled coili4276 – 4296Sequence analysisAdd BLAST21
Coiled coili4363 – 4390Sequence analysisAdd BLAST28

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis

Phylogenomic databases

Ensembl GeneTree

More...
GeneTreei
ENSGT00590000083139

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
G3RWY1

TreeFam database of animal gene trees

More...
TreeFami
TF331316

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.10.20, 1 hit
2.30.230.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR022176 ApoB100_C
IPR015819 Lipid_transp_b-sht_shell
IPR001747 Lipid_transpt_N
IPR009454 Lipid_transpt_open_b-sht
IPR011030 Lipovitellin_superhlx_dom
IPR015816 Vitellinogen_b-sht_N
IPR015255 Vitellinogen_open_b-sht

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF12491 ApoB100_C, 1 hit
PF06448 DUF1081, 1 hit
PF09172 DUF1943, 1 hit
PF01347 Vitellogenin_N, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01169 DUF1943, 1 hit
SM00638 LPD_N, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48431 SSF48431, 1 hit
SSF56968 SSF56968, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51211 VITELLOGENIN, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

G3RWY1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGPPRSALLA LLALPALLLL LAGARAGECS YFCYVADVFL PTLGDATRFK
60 70 80 90 100
HLRKYTYNYE AESSSGVPGT ADSRSATRIN CKVELEVPQP CSFILKTSQC
110 120 130 140 150
TLKEVYGFNP EGKALLKKTK NSEEFAAAMS RYELKLAIPE GKRVFLYPEK
160 170 180 190 200
DEPTYILNIK RGIISALLVP PETEEAEQVL FLDTVYGNCS THFTVKTRKS
210 220 230 240 250
NVATEISTER DLGQCDRFKP IRTGISPLAL IKGMTRPLST LISSSQSCQY
260 270 280 290 300
TLDAKRKHVA EAICKEQHLF LPFSYKNKYG MVAQVTQTLK LEDTPKINSR
310 320 330 340 350
FFGEGTKKMG LAFESTKSTS PPKQAEAVLK TLQELKKLTI SEQNTQRANL
360 370 380 390 400
FNKLVTELRG LSDEAVTSLL PQLIEVSSPI TLQALVQCGQ PQCSTHILQW
410 420 430 440 450
LKRVHANPLL IDVVTYLVAL IPEPSAQQLR EIFNMARDQR SRATLYALSH
460 470 480 490 500
AVNNYHKTNP TGTQELLDIA NYLMEQIQDD CTGDEDYTYL ILRVIGNMGQ
510 520 530 540 550
TMEQLTPELK SSILKCVQST KPSLMIQKAA IQALRKMEPK DKDQEVLLQT
560 570 580 590 600
FLGDASPGDK RLAAYLMLMR SPSQADINKI VQLLPWEQNE QVKNFVASHI
610 620 630 640 650
ANILNSEELD IQDLKKLVKE ALKESQLPTV MDFRKFSRNY QLYKSVSLPS
660 670 680 690 700
LDPASAKIEG NLIFDPNNYL PKESMLKTTL TAFGFASADL IEIGLEGKGF
710 720 730 740 750
EPTLEALFGK QGFFPDSVNK ALYWVNGQVP DGVSKVLVDH FGYTKDDKRE
760 770 780 790 800
QDMVNGMMLS VEKLIKDLKS KEVPEARAYL RILGEELGFA RLHDLQLLGK
810 820 830 840 850
LLLMGARTLQ GIPQMIGEVI RKGSKNDFFL HYIFMENAFE LPTGAGLQLQ
860 870 880 890 900
ISSSGVIAPG AKAGVKLEVA NMQAELVAKP SVSVEFVTNM GIIIPDFARS
910 920 930 940 950
GVQMNTNFFH ESGLEAHVAL KAGQLKFIIP SPKRPVKLLS GGNTLHLVST
960 970 980 990 1000
TKTEVIPPLI ENRQSWSVCK QVFPGLNYCT SGAYSNASST DSASYYPLTG
1010 1020 1030 1040 1050
DSRLELELRP TGEIEQYSVS ATYELQREDR ALVDTLKFVT QAEGAKQTEA
1060 1070 1080 1090 1100
TMTFKYNRQS MTLSSEVQIP DFDVDLGTIL RVNDESTEGK TSYRLTLDIQ
1110 1120 1130 1140 1150
NKKITEVALM GHLSCDTKEE RKIKGVISIP RLQAEARSEI LAHWSPAKLL
1160 1170 1180 1190 1200
LQMDSSATAY GSTVSKRVAW HYDEEKIELE WNTGTNVDTK KMTSNFPVDL
1210 1220 1230 1240 1250
SDYPKSLHMY ANRLLDHSVP QTDMTFRHVG SKLIVAMSSW LQKASGSLPY
1260 1270 1280 1290 1300
TQTLQDHLNS LKEFNLQNMG LPDFHIPENL FLKSDGRVKY TLNKNSLKIE
1310 1320 1330 1340 1350
IPLPFGGKSS RDLKMLETVR TPALHFKSVG FHLPSREFQV PTFTIPKLYQ
1360 1370 1380 1390 1400
LQVPLLGVLD LSTNVYSNLY NWSASYSGGN TSTDHFSLRA RYHMKADSVV
1410 1420 1430 1440 1450
DLLSYNVQGS GETTYDHKNT FTLSCDGSLR HKFLDSNIKF SHVEKLGNNP
1460 1470 1480 1490 1500
VSKGLLIFDA SSSWGPQMSA SVHLDSKKKQ HLFVKEVKID GQFRVSSFYA
1510 1520 1530 1540 1550
KGTYGLSCQR DPNTGRLNGE SNLRFNSSYL QGTNQITGRY EDGTLSLTST
1560 1570 1580 1590 1600
SDLQSGIIKN TASLKYENYE LTLKSDTNGK YKNFATSNKM DMTFSKQNAL
1610 1620 1630 1640 1650
LRSEYQADYE SLRFFSLLSG SLNSHGLELN ADILGTDKIN SGAHKATLRI
1660 1670 1680 1690 1700
GQDGISTSAT TNLKYSLLVL ENELNAELGL SGASMKLTTN GRFKEHNAKF
1710 1720 1730 1740 1750
SLDGKAALTE LSLGSAYQAM ILGVDSKNIF NFKISQEGLK LSNDMMGSYA
1760 1770 1780 1790 1800
EMKFDHTNNL NIAGLTLDFS SKLDNIYSSD KFYKQTVNLQ LQPYSLVTTL
1810 1820 1830 1840 1850
NSDLKYNALD LTNNGKLRLE PLKLHVAGNL KGAYQNNEIK HIYAISSAAL
1860 1870 1880 1890 1900
SASYKADTVA KVQGVEFSHR LNTDIAGLAS AIDMSTNYNS DSLHFSNVFR
1910 1920 1930 1940 1950
SVMAPFTMTI DAHTNGNGKL ALWGEHTGQL YSKFLLKAEP LAFTFSHDYK
1960 1970 1980 1990 2000
GSTNHHLVSR KSISAALEHK VSALLTPAEQ TGTWKLKTQF NNNEYSQDLD
2010 2020 2030 2040 2050
AYNTKDKIGV ELTGRTLADL TLLDSPIKVP LLLSEPINII DALEMRDAIE
2060 2070 2080 2090 2100
KPQEFTIVAF VKYDKNQDVH SINLPFFETL QEYFERNRQT IIVVLENVQR
2110 2120 2130 2140 2150
DLKHINIDQF VRKYRAALGK LPQQANDYLN SFNWERQVSR AKEKLTALTK
2160 2170 2180 2190 2200
KYRITENDIQ IALDDAKINF NEKLSQLQTY MIQFDQYIKD NYDLHDLKIA
2210 2220 2230 2240 2250
IANIIDEIIE KLKSLDEHYH IRVNLVKTIH DLHLFIENIH FNKSGSSTAS
2260 2270 2280 2290 2300
WIQNVDTKYQ IRIQIQEKLQ QLKRHIQNID IQHLAGKLKQ HVEAIDVTVL
2310 2320 2330 2340 2350
LDQSGTTISF ERINDVLEHV KHFVINLIGD FEVAEKINAF RAKVHELIER
2360 2370 2380 2390 2400
YEVDQQIQVL MDKLVELAHQ YKLKETIQKL SNVLQKVKIK DYFEKLVGFI
2410 2420 2430 2440 2450
DDAVKKLNEL SFKTFIEDVN KFLDMLIKKL KSFDYHQFVD ETNDKIREVT
2460 2470 2480 2490 2500
QRLNGEIQAL ELPQKAEALK LFLEETKATV EVYLESLQDT KITLIINWLQ
2510 2520 2530 2540 2550
EALSSASLAH MKAKFRETLE DTRDRMYQMD IQQELQRYLS LVGQVYSTLV
2560 2570 2580 2590 2600
TYISDWWTLA AKNLTDFAEQ YSIQDWAKRV KALVEQGFTV PEIKTILGTM
2610 2620 2630 2640 2650
PAFEVSLQAL QKATFQTPDF IVPLTDLRIP SVQIHFKDLK NIKIPSRFST
2660 2670 2680 2690 2700
PEFTILNTFH IPSFTIDFVE MKVKIIRTID QMLNSELQWP VPDVYLRDLK
2710 2720 2730 2740 2750
VEDIPLARIT LPDFHLPEIA IPEFIIPTLN LNDFQVPDLH IPEFQLPHIS
2760 2770 2780 2790 2800
HTIEVPTFGK LYSILKIQSP LFTLDANADI RNGTTSANEA GIAASITAKG
2810 2820 2830 2840 2850
ESKLEVLNFD FQANAQLSNP KINPLALKES VKFSSKYLRT EHGSEMLFFG
2860 2870 2880 2890 2900
NAIEGKSSTV ASLHTEKNTL ELSNGVIVKI NNQLTLDSNT KYFHKLNIPK
2910 2920 2930 2940 2950
LDFSSQADLR NEIKTLLEAG HIAWTSSGKG SWKWACPRFS DEGTHESQIS
2960 2970 2980 2990 3000
FTIEGPLTSF GLSNKINSKH LRVSQNLVYE SGSLNFSKLE IQSQVDSQHV
3010 3020 3030 3040 3050
GHSVLTAKGT ALFGEGKAEF TGRHDAHLNG KVIGTLKNSL FFSAQPFEIT
3060 3070 3080 3090 3100
ASTNNEGNLK VSFPLRLTGK IDFLNNYALF LSPSAQQASW QVSARFNQYK
3110 3120 3130 3140 3150
YNQNFSAGNN ENIMEAHVGI NGEANLDFLN IPLTIPEMHL PYTIITTPPL
3160 3170 3180 3190 3200
KDFSLWEKTG LKEFLKTTKQ SFDLSVKAQY KKNKHRHSIT NPLAVLYEFT
3210 3220 3230 3240 3250
SQSIKPFDRH FEKNRNNALD FVTKSYNETK IKFDKYKAEK SHDELPRTFQ
3260 3270 3280 3290 3300
IPGYTVPVVN VEVSPFTIEM SAFGYVFPKA VSMPSFTILG SDIRVPSYTL
3310 3320 3330 3340 3350
ILPSLELPVL HVPRNLKLSL PDFKELYTIS HIFIPAMGNI TYDFSFKSSV
3360 3370 3380 3390 3400
ITLNTNAELF NQSDIVAHLL SSSSSVIDAL QYKLEGTTRL TRKRGLKLAT
3410 3420 3430 3440 3450
ALSLSNKFVE GSHNSTVSLT TKYMEASVAT TAKAQIPILR MNFKQELNGN
3460 3470 3480 3490 3500
TKAKPTVSSS MEFKYDFNSS MLYSTAKGAV DHKLSLESLT SYFSIESSTK
3510 3520 3530 3540 3550
GDVKGSVLSR EYSGTIASEA NTYLNSKSTR SSVKLQGTSK IDDIWNLEVK
3560 3570 3580 3590 3600
ENFAGEATLQ RIYSLWEHST KNHLQLEGLF FTNGEHTSKA TLELSPWEMS
3610 3620 3630 3640 3650
ALVQVHASQP SSFHDFPHLG QEVALNANTK NQKIRWKNEV RIHSGSFQSH
3660 3670 3680 3690 3700
VELSNDQEKA HLDIAGSLEG HLRFLKNIIL PVYDKSLWDF LKLDVTTSIG
3710 3720 3730 3740 3750
RRQRLRVSTA FVYTKNPNGY SFSIPVKVLA DKFIIPGLKL NDLNSVLVMP
3760 3770 3780 3790 3800
TFHVPFTDLQ VPSYKLDFRE IKIYKKLRTS SFALNLPTLP EVKFPEVDVL
3810 3820 3830 3840 3850
TKYSQSEDSL IPFFEITVPE SQLTVSQFTL PKSVSDGIAA LDLNAVANKI
3860 3870 3880 3890 3900
ADFELPTIIM PEQTIEIPSI KFSVPAGIVI PSFQALTAHF EVDSPLYNAT
3910 3920 3930 3940 3950
WSASLKNKAD CVETVLDSTC SSTVQFLEYE LNVVGTHKIE DGMLASKTKG
3960 3970 3980 3990 4000
TFAHRDFSAE YEEDGKYEGL QEWEGKAYLN IKSPAFTDLH LRYQKDKKGI
4010 4020 4030 4040 4050
STSAASPAIG TVGMDMDEDD DFSKWNFYYS PQSSPDKKLT IFKTELRVRE
4060 4070 4080 4090 4100
SDEEIQIKVN WEEEAASGLL TSLKDNVPKA TGALYDYVNK YHWEHTGLTL
4110 4120 4130 4140 4150
REASSKLRRN LQNNAEWVYQ GAIRQIDDID VRFQKAASGT TGTYQEWKDK
4160 4170 4180 4190 4200
AQNLYQELLT QEGQANFQGL KDKVFDGLVR VTQEFHMKVK HLIDSLIDFL
4210 4220 4230 4240 4250
NFPRFQFPGK PGIYTREELC TMFIREVGTV LSQVYSKVHN GSEILFSYFQ
4260 4270 4280 4290 4300
DLVITLPFEL RKHKLIEVIS MYRELLKDLS KEAQEVFKAI QSLKTTEVLR
4310 4320 4330 4340 4350
NLQELLQFIF QLIEDNIKQL KEMKFTYLIN YIQDEINTIF NDYIPYVFKL
4360 4370 4380 4390 4400
LKENLCLNLH KFNEFIQNEL QEASQELQQI HQYIMALREE YFDPSIVGWT
4410 4420 4430 4440 4450
VKYYELEEKI VSLIKNLLVS LKDFHSEYIV SASDFTSQLS SQVEQFLHRN
4460 4470 4480 4490 4500
ILEYLSILTD PDGKGKEKIA ELSATAQEII KSQAIATKKI ISDYHQQFRY
4510 4520 4530 4540 4550
KLQDFSDQLS DYYEKFIAES KRLIDLSIQN YHTFLIYIKE LLKKLQSTTV
4560
MNPYMKLAPG ELTIIL
Length:4,566
Mass (Da):516,048
Last modified:February 28, 2018 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iB9E5F139CDF03AF8
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
G3QR49G3QR49_GORGO
Apolipoprotein B
APOB
4,562Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A2I2ZMM5A0A2I2ZMM5_GORGO
Apolipoprotein B
APOB
831Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CABD030014007 Genomic DNA No translation available.

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSGGOT00000028773; ENSGGOP00000020316; ENSGGOG00000005179

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CABD030014007 Genomic DNA No translation available.

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi9593.ENSGGOP00000020316

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSGGOT00000028773; ENSGGOP00000020316; ENSGGOG00000005179

Phylogenomic databases

GeneTreeiENSGT00590000083139
InParanoidiG3RWY1
TreeFamiTF331316

Gene expression databases

BgeeiENSGGOG00000005179 Expressed in 5 organ(s), highest expression level in liver

Family and domain databases

Gene3Di1.25.10.20, 1 hit
2.30.230.10, 1 hit
InterProiView protein in InterPro
IPR022176 ApoB100_C
IPR015819 Lipid_transp_b-sht_shell
IPR001747 Lipid_transpt_N
IPR009454 Lipid_transpt_open_b-sht
IPR011030 Lipovitellin_superhlx_dom
IPR015816 Vitellinogen_b-sht_N
IPR015255 Vitellinogen_open_b-sht
PfamiView protein in Pfam
PF12491 ApoB100_C, 1 hit
PF06448 DUF1081, 1 hit
PF09172 DUF1943, 1 hit
PF01347 Vitellogenin_N, 1 hit
SMARTiView protein in SMART
SM01169 DUF1943, 1 hit
SM00638 LPD_N, 1 hit
SUPFAMiSSF48431 SSF48431, 1 hit
SSF56968 SSF56968, 2 hits
PROSITEiView protein in PROSITE
PS51211 VITELLOGENIN, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiG3RWY1_GORGO
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: G3RWY1
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: February 28, 2018
Last modified: July 3, 2019
This is version 47 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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