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Protein
Submitted name:

Piwi-like RNA-mediated gene silencing 2

Gene
N/A
Organism
Gasterosteus aculeatus (Three-spined stickleback)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processRNA-mediated gene silencingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Piwi-like RNA-mediated gene silencing 2Imported
OrganismiGasterosteus aculeatus (Three-spined stickleback)Imported
Taxonomic identifieri69293 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaPerciformesCottioideiGasterostealesGasterosteidaeGasterosteus
Proteomesi
  • UP000007635 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi69293.ENSGACP00000016981

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini17 – 110PAZInterPro annotationAdd BLAST94
Domaini276 – 566PiwiInterPro annotationAdd BLAST291

Phylogenomic databases

eggNOGiKOG1042 Eukaryota
ENOG410XNRH LUCA
GeneTreeiENSGT00760000119148
InParanoidiG3PHA6
OMAiHHSALEC
TreeFamiTF354206

Family and domain databases

Gene3Di3.30.420.10, 1 hit
InterProiView protein in InterPro
IPR003100 PAZ_dom
IPR036085 PAZ_dom_sf
IPR003165 Piwi
IPR012337 RNaseH-like_sf
IPR036397 RNaseH_sf
PfamiView protein in Pfam
PF02170 PAZ, 1 hit
PF02171 Piwi, 1 hit
SMARTiView protein in SMART
SM00949 PAZ, 1 hit
SM00950 Piwi, 1 hit
SUPFAMiSSF101690 SSF101690, 1 hit
SSF53098 SSF53098, 1 hit
PROSITEiView protein in PROSITE
PS50821 PAZ, 1 hit
PS50822 PIWI, 1 hit

Sequencei

Sequence statusi: Complete.

G3PHA6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
RNALYRQSKE NFQDECTKEL VGSIVITRYN NRTYRIDAID WDNSPKDSFT
60 70 80 90 100
LMDGTKSTFV EYYSKHYGIT IKELDQPLLM HRPKERAKPG GKQIITGEIL
110 120 130 140 150
LVPELSFMTG IPERMKKDFK SMTDLTMHIN MSAEQNTHSI KQLLKNINTN
160 170 180 190 200
PESAKELSQW GLDIDSELVV TAGRTLPLET ICLQSTSFTT AADVSWSREV
210 220 230 240 250
IREASISSIP LNLWAIFYTR RCAEQAEELV STFNKVAGPI GMSLRRPIRV
260 270 280 290 300
ELRDNRTETY LKSIHSQVNN EPNMQLIVCI MEGNRDDLYS AIKKLCCVKS
310 320 330 340 350
PIPSQAINVR TISKPQKLRS IAQKVLLQMN CKLGGELWTV NVPLKHLMVV
360 370 380 390 400
GVDVHHDPSK AHQSVMGFVA SVNSSLTRWY SRVTFQTPNE ELINGFRVCL
410 420 430 440 450
LAALHKYYEL NHNLPEKIVV YRDGVSDGQL TILAQYEIPQ LIKCFETFPS
460 470 480 490 500
YEPKLVFIVV QKRISTTLIN TPNSVRTPPP GTVLDHTLTQ KDWVDFYLLA
510 520 530 540 550
HTSRQGCGLP TRYIALYNTA NLTPDHLQRL TFKMCHMYWN WPGTIRVPAP
560 570 580
CKYAHKLAFL AGQFLHAEPA IQLSDKLFFL
Length:580
Mass (Da):66,166
Last modified:November 16, 2011 - v1
Checksum:i778273EE3421ACA8
GO

Genome annotation databases

EnsembliENSGACT00000017015; ENSGACP00000016981; ENSGACG00000012851

Similar proteinsi

Entry informationi

Entry nameiG3PHA6_GASAC
AccessioniPrimary (citable) accession number: G3PHA6
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: March 28, 2018
This is version 32 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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