UniProtKB - G3N9H3 (G3N9H3_GASAC)
Protein
Submitted name:
Arginine-glutamic acid dipeptide (RE) repeats b
Gene
N/A
Organism
Gasterosteus aculeatus (Three-spined stickleback)
Status
Functioni
GO - Molecular functioni
- sequence-specific DNA binding Source: InterPro
- zinc ion binding Source: InterPro
GO - Biological processi
- regulation of transcription, DNA-templated Source: InterPro
Keywordsi
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Submitted name: Arginine-glutamic acid dipeptide (RE) repeats bImported |
Organismi | Gasterosteus aculeatus (Three-spined stickleback)Imported |
Taxonomic identifieri | 69293 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Neoteleostei › Acanthomorphata › Eupercaria › Perciformes › Cottioidei › Gasterosteales › Gasterosteidae › Gasterosteus |
Proteomesi |
|
Subcellular locationi
Nucleus
- nucleus Source: UniProtKB-KW
Keywords - Cellular componenti
NucleusARBA annotationFamily & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 13 – 111 | ELM2InterPro annotationAdd BLAST | 99 | |
Domaini | 115 – 167 | SANTInterPro annotationAdd BLAST | 53 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 38 | DisorderedSequence analysisAdd BLAST | 38 | |
Regioni | 170 – 237 | DisorderedSequence analysisAdd BLAST | 68 | |
Regioni | 278 – 645 | DisorderedSequence analysisAdd BLAST | 368 | |
Regioni | 657 – 708 | DisorderedSequence analysisAdd BLAST | 52 | |
Regioni | 727 – 751 | DisorderedSequence analysisAdd BLAST | 25 | |
Regioni | 1151 – 1176 | DisorderedSequence analysisAdd BLAST | 26 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 1 – 17 | PolarSequence analysisAdd BLAST | 17 | |
Compositional biasi | 186 – 208 | PolarSequence analysisAdd BLAST | 23 | |
Compositional biasi | 303 – 337 | PolarSequence analysisAdd BLAST | 35 | |
Compositional biasi | 338 – 423 | PolyampholyteSequence analysisAdd BLAST | 86 | |
Compositional biasi | 424 – 452 | PolarSequence analysisAdd BLAST | 29 | |
Compositional biasi | 527 – 557 | PolarSequence analysisAdd BLAST | 31 | |
Compositional biasi | 581 – 595 | Pro-richSequence analysisAdd BLAST | 15 | |
Compositional biasi | 609 – 645 | Pro-richSequence analysisAdd BLAST | 37 | |
Compositional biasi | 664 – 693 | PolarSequence analysisAdd BLAST | 30 |
Keywords - Domaini
Zinc-fingerARBA annotationPhylogenomic databases
eggNOGi | KOG2133, Eukaryota |
GeneTreei | ENSGT00940000153615 |
OMAi | QRMAMEQ |
TreeFami | TF328554 |
Family and domain databases
CDDi | cd00202, ZnF_GATA, 1 hit |
Gene3Di | 3.30.50.10, 1 hit |
InterProi | View protein in InterPro IPR002951, Atrophin-like IPR000949, ELM2_dom IPR009057, Homeobox-like_sf IPR001005, SANT/Myb IPR017884, SANT_dom IPR000679, Znf_GATA IPR013088, Znf_NHR/GATA |
Pfami | View protein in Pfam PF03154, Atrophin-1, 1 hit PF01448, ELM2, 1 hit |
SMARTi | View protein in SMART SM01189, ELM2, 1 hit SM00717, SANT, 1 hit SM00401, ZnF_GATA, 1 hit |
SUPFAMi | SSF46689, SSF46689, 1 hit |
PROSITEi | View protein in PROSITE PS51156, ELM2, 1 hit PS51293, SANT, 1 hit |
i Sequence
Sequence statusi: Complete.
G3N9H3-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
PSHRCRSLNS TQGEIRVGPS HQAKLPEMQP RSAPSLQTQT QSEELMWTPG
60 70 80 90 100
VNDSFLLLRS MAAFAGMCDG GSTEDGCLAA SRDDTTLNAL NMLHASHYDA
110 120 130 140 150
AKALQRLVKK PLPKLIEKCW SEDDVKRFIK GLRQYGKNFF RIRKDFLPTK
160 170 180 190 200
KTGELITFYY HWKKTPEAAG TRAYRQQRRQ PSSRKAKTRS AAAPVTPSRN
210 220 230 240 250
YSVDASSASE DDLDSEDSEQ DVKSCSRCGT TSSKDWHQGR RDNALLCTTC
260 270 280 290 300
RTYENKHGCL PPAPKCAGAP FMFKPVKEEE EVNSKHGMRT RRSRAPLSTL
310 320 330 340 350
RSGHRRLTGS PTNEDHQSSQ PSPSVTTSNS LRSSSTDIKN ESSKKTNKKL
360 370 380 390 400
KEELTSPKTT KRARESPAQE PDEAEKAAPK RPKTRDPRSS RSDGEAEVEE
410 420 430 440 450
ESSSESRSAQ DDGSSDTKDI DQDNRSSSPS IPSPQQGNES DSDSSAQPNG
460 470 480 490 500
VQSDPGAVAA AVSADPPTPQ APPSHGRPIT PMQSTPLLIL PEPPPAPQTP
510 520 530 540 550
SASCCQLAAQ RRSGRPQLAP HSLSAPPCLP SASSQDSPLS AAFQPPPVLN
560 570 580 590 600
STHPRGQSPQ GPPRPAPFFR ESQLPQSALS GPQVKPPPTT PIPPSHKQMP
610 620 630 640 650
HQSATPFPQM PANLPPPPAL KPLNILPNQH PPGAPPPPLQ LMPQPLPMQL
660 670 680 690 700
LPTQLPVISP VPNHPGKSMT SSHPPASASH PLTSVTPSNI GPVPSLQPSF
710 720 730 740 750
PPLPLRPSSI TMAGGCQIQI KEEPLDEIEE AESSPSPPRS PSPEPTVVSV
760 770 780 790 800
ASHASQSARF IKHLDRGYNS CARTDLFFTP LSSSKLAKKR EEAVEKSRRE
810 820 830 840 850
AELCARQERE SFPSCFKRLQ SYSCLERASS SSHDSRMSDV QMTVQGHGRP
860 870 880 890 900
SFEQPPTTVA AVPPYIGPDT PALRTLSEYA RPHVMSPSNR SHPFYVSLSP
910 920 930 940 950
GDPLLAYHMP GLYSAEPSHR ERELRNMRER ELRERMKPGF EVKPPDMETL
960 970 980 990 1000
HPSANPMEHF ARHGAIGLPH IPGPPHHFAS FHPGLNQMER ERMMLAGPQL
1010 1020 1030 1040 1050
RPELSYAERL TAERLHAERM ASVATDPAVR LQMLNVTPHH HQHSHIHSHL
1060 1070 1080 1090 1100
HLHQQDPLGQ GSGPHPLVDP LATGPRLARF PFPGGPIHNQ LLSDLPHDHE
1110 1120 1130 1140 1150
MLRHPLFGGA YPRELQGPIP QMSAAHQLQA MHAQSAELQR MAMEQQWLHG
1160 1170
HHLHGGPLPS QEDYYSRLKK EGDKPS
Genome annotation databases
Ensembli | ENSGACT00000001966; ENSGACP00000001963; ENSGACG00000001510 |
Similar proteinsi
Cross-referencesi
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 69293.ENSGACP00000001963 |
Genome annotation databases
Ensembli | ENSGACT00000001966; ENSGACP00000001963; ENSGACG00000001510 |
Phylogenomic databases
eggNOGi | KOG2133, Eukaryota |
GeneTreei | ENSGT00940000153615 |
OMAi | QRMAMEQ |
TreeFami | TF328554 |
Family and domain databases
CDDi | cd00202, ZnF_GATA, 1 hit |
Gene3Di | 3.30.50.10, 1 hit |
InterProi | View protein in InterPro IPR002951, Atrophin-like IPR000949, ELM2_dom IPR009057, Homeobox-like_sf IPR001005, SANT/Myb IPR017884, SANT_dom IPR000679, Znf_GATA IPR013088, Znf_NHR/GATA |
Pfami | View protein in Pfam PF03154, Atrophin-1, 1 hit PF01448, ELM2, 1 hit |
SMARTi | View protein in SMART SM01189, ELM2, 1 hit SM00717, SANT, 1 hit SM00401, ZnF_GATA, 1 hit |
SUPFAMi | SSF46689, SSF46689, 1 hit |
PROSITEi | View protein in PROSITE PS51156, ELM2, 1 hit PS51293, SANT, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | G3N9H3_GASAC | |
Accessioni | G3N9H3Primary (citable) accession number: G3N9H3 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | November 16, 2011 |
Last sequence update: | November 16, 2011 | |
Last modified: | October 7, 2020 | |
This is version 55 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |