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Protein
Submitted name:

DNA-binding protein RFXANK

Gene

I79_005072

Organism
Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-binding protein RFXANKImported
Gene namesi
ORF Names:I79_005072Imported
OrganismiCricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus)Imported
Taxonomic identifieri10029 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaCricetidaeCricetinaeCricetulus
Proteomesi
  • UP000001075 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiG3H472

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini124 – 277ANK_REP_REGIONInterPro annotationAdd BLAST154
Repeati158 – 190ANKPROSITE-ProRule annotationAdd BLAST33
Repeati191 – 223ANKPROSITE-ProRule annotationAdd BLAST33
Repeati224 – 256ANKPROSITE-ProRule annotationAdd BLAST33

Keywords - Domaini

ANK repeatPROSITE-ProRule annotation

Phylogenomic databases

InParanoidiG3H472

Family and domain databases

CDDicd00204 ANK, 1 hit
Gene3Di1.25.40.20, 1 hit
InterProiView protein in InterPro
IPR002110 Ankyrin_rpt
IPR020683 Ankyrin_rpt-contain_dom
IPR036770 Ankyrin_rpt-contain_sf
IPR017362 DNA-bd_RFXANK
PfamiView protein in Pfam
PF12796 Ank_2, 1 hit
PF13606 Ank_3, 1 hit
PIRSFiPIRSF038034 DNA-binding_RFXANK, 2 hits
SMARTiView protein in SMART
SM00248 ANK, 4 hits
SUPFAMiSSF48403 SSF48403, 1 hit
PROSITEiView protein in PROSITE
PS50297 ANK_REP_REGION, 1 hit
PS50088 ANK_REPEAT, 3 hits

Sequencei

Sequence statusi: Complete.

G3H472-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEPTQLAENL IPNQQSPVPE LEDPEDPRDE SPDSSDTVVL SLFPCTPEAL
60 70 80 90 100
NPEADASAPS LQVPEYCHHC SRRLPDLMST HSCSPLSDHS NTDLSPASGS
110 120 130 140 150
FLKHSTTLTN RQRGNEVSAL PATLDSLSVH QLAAQGELSQ LKDHLRKGDN
160 170 180 190 200
LINKPDERGF TPLIWASAFG EIETVRFLLD WGADPHILAK ERESALSLAS
210 220 230 240 250
MGGYTDIVRL LLEQDVDINT YDWNGGTPLL YAVRGNHVKC VEALLARGAD
260 270 280 290
LTTEADSGYT PMDLAVALGY RKVQQVMETH ILKLFQSTLG PADPE
Length:295
Mass (Da):32,232
Last modified:November 16, 2011 - v1
Checksum:iE399212C7110D573
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JH000137 Genomic DNA Translation: EGV97414.1
RefSeqiXP_007635810.1, XM_007637620.2

Genome annotation databases

GeneIDi100768124

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JH000137 Genomic DNA Translation: EGV97414.1
RefSeqiXP_007635810.1, XM_007637620.2

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiG3H472

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100768124

Organism-specific databases

CTDi8625

Phylogenomic databases

InParanoidiG3H472

Family and domain databases

CDDicd00204 ANK, 1 hit
Gene3Di1.25.40.20, 1 hit
InterProiView protein in InterPro
IPR002110 Ankyrin_rpt
IPR020683 Ankyrin_rpt-contain_dom
IPR036770 Ankyrin_rpt-contain_sf
IPR017362 DNA-bd_RFXANK
PfamiView protein in Pfam
PF12796 Ank_2, 1 hit
PF13606 Ank_3, 1 hit
PIRSFiPIRSF038034 DNA-binding_RFXANK, 2 hits
SMARTiView protein in SMART
SM00248 ANK, 4 hits
SUPFAMiSSF48403 SSF48403, 1 hit
PROSITEiView protein in PROSITE
PS50297 ANK_REP_REGION, 1 hit
PS50088 ANK_REPEAT, 3 hits
ProtoNetiSearch...

Entry informationi

Entry nameiG3H472_CRIGR
AccessioniPrimary (citable) accession number: G3H472
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: June 20, 2018
This is version 36 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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