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Protein
Submitted name:

Pentraxin-related protein PTX3

Gene

I79_004217

Organism
Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Pentraxin-related protein PTX3Imported
Gene namesi
ORF Names:I79_004217Imported
OrganismiCricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus)Imported
Taxonomic identifieri10029 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaCricetidaeCricetinaeCricetulus
Proteomesi
  • UP000001075 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 17Sequence analysisAdd BLAST17
ChainiPRO_500344408818 – 381Sequence analysisAdd BLAST364

Proteomic databases

PRIDEiG3H217

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini205 – 346LamGLInterPro annotationAdd BLAST142

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

InParanoidiG3H217

Family and domain databases

InterProiView protein in InterPro
IPR013320 ConA-like_dom_sf
IPR006558 LamG-like
IPR030476 Pentaxin_CS
IPR001759 Pentraxin-related
PfamiView protein in Pfam
PF00354 Pentaxin, 1 hit
PRINTSiPR00895 PENTAXIN
SMARTiView protein in SMART
SM00560 LamGL, 1 hit
SM00159 PTX, 1 hit
SUPFAMiSSF49899 SSF49899, 1 hit
PROSITEiView protein in PROSITE
PS00289 PTX_1, 1 hit
PS51828 PTX_2, 1 hit

Sequencei

Sequence statusi: Complete.

G3H217-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MHLPAILLCA FWCAVLAETS DDYELMYVHL DNEIDNGLHP TEDPTPCDCR
60 70 80 90 100
PEHSEWDKLF IMLENSQMRE GMLLQATDDV LRGELQRLRA ELGRLAGGMA
110 120 130 140 150
RPCAAGGPTD ARLARVLEPL LQESRDVSRR LARLEDAEAR RPEATVPGLG
160 170 180 190 200
AVLEELQRTR ADLSAVQSWL ARRWLPAGCE TAILFPMRSK KIFGSVHPVR
210 220 230 240 250
PMKLESFSTC IWVKATDVLN KTILFSYGTK WNPYEIQLYL SSQSLVFVVG
260 270 280 290 300
GKENKLTADI VVSLGRWTHL CGTWSSEQGS MSLWVNGERV ATTVEMAMLH
310 320 330 340 350
SVPEGGILQI GQEKNGCCVG GGFDETLAFS GRITGFNIWD RVLSEEEIRE
360 370 380
SGGVESCHIR GNIVGWGVTE IQPHGGAQYV S
Length:381
Mass (Da):42,242
Last modified:November 16, 2011 - v1
Checksum:i934FED35BC43188A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JH000112 Genomic DNA Translation: EGV93547.1
RefSeqiXP_003498452.1, XM_003498404.3

Genome annotation databases

GeneIDi100754664
KEGGicge:100754664

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JH000112 Genomic DNA Translation: EGV93547.1
RefSeqiXP_003498452.1, XM_003498404.3

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiG3H217

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100754664
KEGGicge:100754664

Organism-specific databases

CTDi5806

Phylogenomic databases

InParanoidiG3H217

Family and domain databases

InterProiView protein in InterPro
IPR013320 ConA-like_dom_sf
IPR006558 LamG-like
IPR030476 Pentaxin_CS
IPR001759 Pentraxin-related
PfamiView protein in Pfam
PF00354 Pentaxin, 1 hit
PRINTSiPR00895 PENTAXIN
SMARTiView protein in SMART
SM00560 LamGL, 1 hit
SM00159 PTX, 1 hit
SUPFAMiSSF49899 SSF49899, 1 hit
PROSITEiView protein in PROSITE
PS00289 PTX_1, 1 hit
PS51828 PTX_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiG3H217_CRIGR
AccessioniPrimary (citable) accession number: G3H217
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: June 20, 2018
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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