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Protein
Submitted name:

Uncharacterized protein

Gene

SNX16

Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:SNX16Imported
OrganismiOryctolagus cuniculus (Rabbit)Imported
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
Proteomesi
  • UP000001811 Componenti: Chromosome 3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSOCUG00000023666 Expressed in 3 organ(s), highest expression level in prefrontal cortex

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000019890

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini105 – 218PXInterPro annotationAdd BLAST114

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili230 – 278Sequence analysisAdd BLAST49

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IMHW Eukaryota
ENOG410Z8KU LUCA
GeneTreeiENSGT00390000005651
InParanoidiG1TS77
KOiK17928
OMAiETNYRFQ
OrthoDBiEOG091G0JVO
TreeFamiTF324116

Family and domain databases

CDDicd07276 PX_SNX16, 1 hit
Gene3Di3.30.1520.10, 1 hit
InterProiView protein in InterPro
IPR001683 Phox
IPR036871 PX_dom_sf
IPR037911 SNX16_PX
PfamiView protein in Pfam
PF00787 PX, 1 hit
SMARTiView protein in SMART
SM00312 PX, 1 hit
SUPFAMiSSF64268 SSF64268, 1 hit
PROSITEiView protein in PROSITE
PS50195 PX, 1 hit

Sequencei

Sequence statusi: Complete.

G1TS77-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MATPYVPVPM PIGNSASSFT ANRNQRSSSF GSTSTSSNSS KGQLEDSNMG
60 70 80 90 100
NFKQTTVPDQ MDGTSSVCSS PLIRTKFTGT DSSIEYSARP RETEEQNSER
110 120 130 140 150
VNFEERPSTP TILGYEVMEE RAKFTVYKIL VKKNAEESWV VFRRYTDFSR
160 170 180 190 200
LNDKLKEMFP GFRLALPPKR WFKDNYNADF LEDRQLGLQA FLQNLVAHKD
210 220 230 240 250
IANCLAVREF LCLDDPPGPF DSLEESRAFC ETLEETNYHL QKELLEKQKE
260 270 280 290 300
IESLKKLVND QQLHIDTLEN RIRTLSLEPE ESLYVSTTEA NQVLKMDSSA
310 320 330 340
LEGDQDVLDE ESRADSKPCL SLSEPDSAIS EIEVAEVAYS AEED
Length:344
Mass (Da):38,957
Last modified:November 13, 2013 - v2
Checksum:i2A4B48AA6F8B65B4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAGW02012052 Genomic DNA No translation available.
RefSeqiXP_002710708.1, XM_002710662.3

Genome annotation databases

EnsembliENSOCUT00000024693; ENSOCUP00000019890; ENSOCUG00000023666
GeneIDi100347728
KEGGiocu:100347728

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAGW02012052 Genomic DNA No translation available.
RefSeqiXP_002710708.1, XM_002710662.3

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000019890

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSOCUT00000024693; ENSOCUP00000019890; ENSOCUG00000023666
GeneIDi100347728
KEGGiocu:100347728

Organism-specific databases

CTDi64089

Phylogenomic databases

eggNOGiENOG410IMHW Eukaryota
ENOG410Z8KU LUCA
GeneTreeiENSGT00390000005651
InParanoidiG1TS77
KOiK17928
OMAiETNYRFQ
OrthoDBiEOG091G0JVO
TreeFamiTF324116

Gene expression databases

BgeeiENSOCUG00000023666 Expressed in 3 organ(s), highest expression level in prefrontal cortex

Family and domain databases

CDDicd07276 PX_SNX16, 1 hit
Gene3Di3.30.1520.10, 1 hit
InterProiView protein in InterPro
IPR001683 Phox
IPR036871 PX_dom_sf
IPR037911 SNX16_PX
PfamiView protein in Pfam
PF00787 PX, 1 hit
SMARTiView protein in SMART
SM00312 PX, 1 hit
SUPFAMiSSF64268 SSF64268, 1 hit
PROSITEiView protein in PROSITE
PS50195 PX, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiG1TS77_RABIT
AccessioniPrimary (citable) accession number: G1TS77
Entry historyiIntegrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: November 13, 2013
Last modified: November 7, 2018
This is version 43 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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