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Protein
Submitted name:

Uncharacterized protein

Gene

SNRNP35

Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:SNRNP35Imported
OrganismiOryctolagus cuniculus (Rabbit)Imported
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
Proteomesi
  • UP000001811 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSOCUG00000021248 Expressed in 3 organ(s), highest expression level in liver

Interactioni

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000016734

Structurei

3D structure databases

ProteinModelPortaliG1TIG4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini51 – 129RRMInterPro annotationAdd BLAST79

Phylogenomic databases

eggNOGiKOG0113 Eukaryota
COG0724 LUCA
GeneTreeiENSGT00530000063750
InParanoidiG1TIG4
KOiK13155
OMAiPENDWER
OrthoDBiEOG091G0NV3
TreeFamiTF331614

Family and domain databases

CDDicd12237 RRM_snRNP35, 1 hit
Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
IPR034146 snRNP35_RRM
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit

Sequencei

Sequence statusi: Complete.

G1TIG4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNDWMPIAKE YDPLKAGSID GTDEDPHDRA VWRAMLARYV PNKGVTGDPL
60 70 80 90 100
LTLFVARLNL QTKEDKLKEV FSRYGDIRRL RLVRDLVTGF SKGYAFVEYK
110 120 130 140 150
EERALLRAYR DADGLVIDQH EIFVDYELER TLKGWIPRRL GGGLGGKKES
160 170 180 190 200
GQLRFGGRDR PFRKPINLPV VKNELYREGK RERRERSRSR ERHWDSRARD
210 220 230 240
REHGRGREKR WQDREQARAW PDSDWERERD LREDRARGKE RRGRSK
Length:246
Mass (Da):29,290
Last modified:October 19, 2011 - v1
Checksum:i7A8E5BBB63F7F593
GO

Sequence databases

RefSeqiXP_008249852.1, XM_008251630.2

Genome annotation databases

EnsembliENSOCUT00000025931; ENSOCUP00000016734; ENSOCUG00000021248
GeneIDi100346335
KEGGiocu:100346335

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_008249852.1, XM_008251630.2

3D structure databases

ProteinModelPortaliG1TIG4
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000016734

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSOCUT00000025931; ENSOCUP00000016734; ENSOCUG00000021248
GeneIDi100346335
KEGGiocu:100346335

Organism-specific databases

CTDi11066

Phylogenomic databases

eggNOGiKOG0113 Eukaryota
COG0724 LUCA
GeneTreeiENSGT00530000063750
InParanoidiG1TIG4
KOiK13155
OMAiPENDWER
OrthoDBiEOG091G0NV3
TreeFamiTF331614

Gene expression databases

BgeeiENSOCUG00000021248 Expressed in 3 organ(s), highest expression level in liver

Family and domain databases

CDDicd12237 RRM_snRNP35, 1 hit
Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
IPR034146 snRNP35_RRM
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiG1TIG4_RABIT
AccessioniPrimary (citable) accession number: G1TIG4
Entry historyiIntegrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: October 10, 2018
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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