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UniProtKB - G1ST53 (G1ST53_RABIT)
Protein
Submitted name:
C-X3-C motif chemokine ligand 1
Gene
CX3CL1
Organism
Oryctolagus cuniculus (Rabbit)
Status
Functioni
GO - Molecular functioni
- chemoattractant activity Source: Ensembl
- chemokine activity Source: Ensembl
- CX3C chemokine receptor binding Source: Ensembl
- CXCR1 chemokine receptor binding Source: Ensembl
- integrin binding Source: Ensembl
GO - Biological processi
- angiogenesis involved in wound healing Source: Ensembl
- cell adhesion Source: Ensembl
- chemokine-mediated signaling pathway Source: Ensembl
- immune response Source: InterPro
- integrin activation Source: Ensembl
- leukocyte adhesive activation Source: InterPro
- leukocyte migration involved in inflammatory response Source: Ensembl
- lymphocyte chemotaxis Source: Ensembl
- microglial cell proliferation Source: Ensembl
- negative regulation of cell migration Source: Ensembl
- negative regulation of extrinsic apoptotic signaling pathway in absence of ligand Source: Ensembl
- negative regulation of hippocampal neuron apoptotic process Source: Ensembl
- negative regulation of tumor necrosis factor production Source: Ensembl
- neutrophil chemotaxis Source: Ensembl
- positive regulation of actin filament bundle assembly Source: Ensembl
- positive regulation of calcium-independent cell-cell adhesion Source: Ensembl
- positive regulation of cell population proliferation Source: Ensembl
- positive regulation of I-kappaB phosphorylation Source: Ensembl
- positive regulation of inflammatory response Source: Ensembl
- positive regulation of MAPK cascade Source: Ensembl
- positive regulation of microglial cell migration Source: Ensembl
- positive regulation of NF-kappaB transcription factor activity Source: Ensembl
- positive regulation of protein kinase B signaling Source: Ensembl
- positive regulation of release of sequestered calcium ion into cytosol Source: Ensembl
- positive regulation of transforming growth factor beta1 production Source: Ensembl
- regulation of lipopolysaccharide-mediated signaling pathway Source: Ensembl
Keywordsi
Molecular function | CytokineARBA annotation |
Biological process | ChemotaxisARBA annotation |
Names & Taxonomyi
Protein namesi | Submitted name: C-X3-C motif chemokine ligand 1Imported |
Gene namesi | Name:CX3CL1Imported |
Organismi | Oryctolagus cuniculus (Rabbit)Imported |
Taxonomic identifieri | 9986 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Lagomorpha › Leporidae › Oryctolagus |
Proteomesi |
|
Subcellular locationi
Extracellular region or secreted
- extracellular space Source: UniProtKB-KW
Plasma Membrane
- plasma membrane Source: Ensembl
Other locations
- cell surface Source: Ensembl
- integral component of membrane Source: UniProtKB-KW
- neuron projection Source: Ensembl
- neuronal cell body Source: Ensembl
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 349 – 369 | HelicalSequence analysisAdd BLAST | 21 |
Keywords - Cellular componenti
MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 24 | Sequence analysisAdd BLAST | 24 | |
ChainiPRO_5003422325 | 25 – 404 | Sequence analysisAdd BLAST | 380 |
Expressioni
Gene expression databases
Bgeei | ENSOCUG00000007482, Expressed in brain and 19 other tissues |
Interactioni
GO - Molecular functioni
- chemoattractant activity Source: Ensembl
- chemokine activity Source: Ensembl
- CX3C chemokine receptor binding Source: Ensembl
- CXCR1 chemokine receptor binding Source: Ensembl
- integrin binding Source: Ensembl
Protein-protein interaction databases
STRINGi | 9986.ENSOCUP00000006470 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 29 – 89 | SCYInterPro annotationAdd BLAST | 61 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 96 – 321 | DisorderedSequence analysisAdd BLAST | 226 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 146 – 181 | Polar residuesSequence analysisAdd BLAST | 36 | |
Compositional biasi | 197 – 256 | Polar residuesSequence analysisAdd BLAST | 60 | |
Compositional biasi | 293 – 310 | Polar residuesSequence analysisAdd BLAST | 18 |
Keywords - Domaini
SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysisPhylogenomic databases
eggNOGi | ENOG502SNIE, Eukaryota |
GeneTreei | ENSGT01030000234602 |
HOGENOMi | CLU_738793_0_0_1 |
InParanoidi | G1ST53 |
OMAi | QNQESCG |
OrthoDBi | 1060256at2759 |
TreeFami | TF337534 |
Family and domain databases
InterProi | View protein in InterPro IPR039809, Chemokine_b/g/d IPR001811, Chemokine_IL8-like_dom IPR008097, CX3CL1 IPR036048, Interleukin_8-like_sf |
PANTHERi | PTHR12015, PTHR12015, 2 hits PTHR12015:SF92, PTHR12015:SF92, 2 hits |
Pfami | View protein in Pfam PF00048, IL8, 1 hit |
SMARTi | View protein in SMART SM00199, SCY, 1 hit |
SUPFAMi | SSF54117, SSF54117, 1 hit |
i Sequence
Sequence statusi: Complete.
G1ST53-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAPIAPQWLL RLAAFCPLMV PLAGQHLGVA KCSIICNNMT PKIPVALLIS
60 70 80 90 100
YQWNQESCGK PAIVLETKRH KRFCADPQAP WVQEAMKHLD RQAVARTPNS
110 120 130 140 150
GTFEKQIGAV KPGASTVKPG TTAAPGGMPE PAVSEPRPTG DSRSPEPTPA
160 170 180 190 200
PQEAQTTLGT SPALPAGVPS SSGSGSLVTQ KPQDGRPPVG PTGPEFVNTA
210 220 230 240 250
PVSTAGSWQT SAHQHGATES PSAETPSTEH PSTQALTTSY PASEENLGSE
260 270 280 290 300
SQSPGAPALS PRPGDPQSTW ETVPVVAHTG AFQDGGAGST AYASVVPGSS
310 320 330 340 350
EGTPSREPAA SGSWTPKAEE PVHATVDPQR LGVLITPVPD SQAATRRQAV
360 370 380 390 400
GLLAFLGLLF CLGVAMFAYQ SLQGCPRKMA GEMVEGLRYV PRSCGANSYV
LVPV
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AAGW02052842 Genomic DNA No translation available. |
RefSeqi | XP_002711587.1, XM_002711541.3 |
Genome annotation databases
Ensembli | ENSOCUT00000007479; ENSOCUP00000006470; ENSOCUG00000007482 |
GeneIDi | 100346186 |
KEGGi | ocu:100346186 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AAGW02052842 Genomic DNA No translation available. |
RefSeqi | XP_002711587.1, XM_002711541.3 |
3D structure databases
SMRi | G1ST53 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 9986.ENSOCUP00000006470 |
Genome annotation databases
Ensembli | ENSOCUT00000007479; ENSOCUP00000006470; ENSOCUG00000007482 |
GeneIDi | 100346186 |
KEGGi | ocu:100346186 |
Organism-specific databases
CTDi | 6376 |
Phylogenomic databases
eggNOGi | ENOG502SNIE, Eukaryota |
GeneTreei | ENSGT01030000234602 |
HOGENOMi | CLU_738793_0_0_1 |
InParanoidi | G1ST53 |
OMAi | QNQESCG |
OrthoDBi | 1060256at2759 |
TreeFami | TF337534 |
Gene expression databases
Bgeei | ENSOCUG00000007482, Expressed in brain and 19 other tissues |
Family and domain databases
InterProi | View protein in InterPro IPR039809, Chemokine_b/g/d IPR001811, Chemokine_IL8-like_dom IPR008097, CX3CL1 IPR036048, Interleukin_8-like_sf |
PANTHERi | PTHR12015, PTHR12015, 2 hits PTHR12015:SF92, PTHR12015:SF92, 2 hits |
Pfami | View protein in Pfam PF00048, IL8, 1 hit |
SMARTi | View protein in SMART SM00199, SCY, 1 hit |
SUPFAMi | SSF54117, SSF54117, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | G1ST53_RABIT | |
Accessioni | G1ST53Primary (citable) accession number: G1ST53 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | October 19, 2011 |
Last sequence update: | October 19, 2011 | |
Last modified: | September 29, 2021 | |
This is version 62 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |