UniProtKB - G1LU97 (G1LU97_AILME)
Protein
Paired domain-containing protein
Gene
PAX5
Organism
Ailuropoda melanoleuca (Giant panda)
Status
Functioni
GO - Molecular functioni
- DNA-binding transcription activator activity, RNA polymerase II-specific Source: Ensembl
- RNA polymerase II cis-regulatory region sequence-specific DNA binding Source: Ensembl
GO - Biological processi
- adult behavior Source: Ensembl
- aging Source: Ensembl
- cerebral cortex development Source: Ensembl
- embryonic cranial skeleton morphogenesis Source: Ensembl
- lateral ventricle development Source: Ensembl
- negative regulation of histone H3-K9 methylation Source: Ensembl
- negative regulation of transcription by RNA polymerase II Source: Ensembl
- skeletal muscle cell differentiation Source: Ensembl
Keywordsi
Molecular function | Developmental proteinARBA annotation |
Biological process | Transcription, Transcription regulationARBA annotation |
Names & Taxonomyi
Protein namesi | Recommended name: Paired domain-containing proteinInterPro annotation |
Gene namesi | Name:PAX5Imported |
Organismi | Ailuropoda melanoleuca (Giant panda)Imported |
Taxonomic identifieri | 9646 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Carnivora › Caniformia › Ursidae › Ailuropoda |
Proteomesi |
|
Subcellular locationi
Nucleus
- Nucleus ARBA annotation
Cytosol
- cytosol Source: Ensembl
Nucleus
- fibrillar center Source: Ensembl
- nucleoplasm Source: Ensembl
Keywords - Cellular componenti
NucleusARBA annotationFamily & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 16 – 142 | PairedInterPro annotationAdd BLAST | 127 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 20 | DisorderedSequence analysisAdd BLAST | 20 | |
Regioni | 182 – 218 | DisorderedSequence analysisAdd BLAST | 37 |
Keywords - Domaini
Paired boxARBA annotationPhylogenomic databases
eggNOGi | KOG3862, Eukaryota |
GeneTreei | ENSGT00940000159636 |
HOGENOMi | CLU_019281_4_0_1 |
InParanoidi | G1LU97 |
OMAi | QPSCPIQ |
OrthoDBi | 592933at2759 |
TreeFami | TF315397 |
Family and domain databases
CDDi | cd00131, PAX, 1 hit |
Gene3Di | 1.10.10.10, 2 hits |
InterProi | View protein in InterPro IPR009057, Homeobox-like_sf IPR043182, PAIRED_DNA_bd_dom IPR001523, Paired_dom IPR022130, Pax2_C IPR043565, PAX_fam IPR036388, WH-like_DNA-bd_sf |
PANTHERi | PTHR45636, PTHR45636, 1 hit |
Pfami | View protein in Pfam PF00292, PAX, 1 hit PF12403, Pax2_C, 1 hit |
PRINTSi | PR00027, PAIREDBOX |
SMARTi | View protein in SMART SM00351, PAX, 1 hit |
SUPFAMi | SSF46689, SSF46689, 1 hit |
PROSITEi | View protein in PROSITE PS00034, PAIRED_1, 1 hit PS51057, PAIRED_2, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
G1LU97-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MDLEKNYPTP RTGRTGHGGV NQLGGVFVNG RPLPDVVRQR IVELAHQGVR
60 70 80 90 100
PCDISRQLRV SHGCVSKILG RYYETGSIKP GVIGGSKPKV ATPKVVEKIA
110 120 130 140 150
EYKRQNPTMF AWEIRDRLLA ERVCDNDTVP SVSSINRIIR TKVQQPPNQP
160 170 180 190 200
VPASSHSIVS TGSVTQVSSV STDSAGSSYS ISGILGITSP SADTNKRKRD
210 220 230 240 250
EGIQDSPVPN GHSLPGRDFL RKQMRGDLFT QQQLEVLDRV FERQHYSDIF
260 270 280 290 300
TTTEPIKPEQ TTEYSAMASL AGGLDDMKAN LSSPTPADIG SSVPGPQSYP
310 320 330 340 350
IVTGRDLAST TLPGYPPHVP PAGQGSYSAP TLTGMVPGSE FSGSPYSHPQ
360 370 380 390
YPSYNDSWRF PNPGLLGSPY YYSAAARGAA PPAAATAYDR H
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketG1LUA1 | G1LUA1_AILME | Paired domain-containing protein | PAX5 | 278 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | ACTA01050964 Genomic DNA No translation available. ACTA01058964 Genomic DNA No translation available. ACTA01066964 Genomic DNA No translation available. ACTA01074964 Genomic DNA No translation available. ACTA01082964 Genomic DNA No translation available. ACTA01090964 Genomic DNA No translation available. ACTA01098964 Genomic DNA No translation available. |
RefSeqi | XP_011222869.1, XM_011224567.2 |
Genome annotation databases
Ensembli | ENSAMET00000011105; ENSAMEP00000010645; ENSAMEG00000010127 |
GeneIDi | 100481668 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | ACTA01050964 Genomic DNA No translation available. ACTA01058964 Genomic DNA No translation available. ACTA01066964 Genomic DNA No translation available. ACTA01074964 Genomic DNA No translation available. ACTA01082964 Genomic DNA No translation available. ACTA01090964 Genomic DNA No translation available. ACTA01098964 Genomic DNA No translation available. |
RefSeqi | XP_011222869.1, XM_011224567.2 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 9646.ENSAMEP00000010645 |
Genome annotation databases
Ensembli | ENSAMET00000011105; ENSAMEP00000010645; ENSAMEG00000010127 |
GeneIDi | 100481668 |
Organism-specific databases
CTDi | 5079 |
Phylogenomic databases
eggNOGi | KOG3862, Eukaryota |
GeneTreei | ENSGT00940000159636 |
HOGENOMi | CLU_019281_4_0_1 |
InParanoidi | G1LU97 |
OMAi | QPSCPIQ |
OrthoDBi | 592933at2759 |
TreeFami | TF315397 |
Family and domain databases
CDDi | cd00131, PAX, 1 hit |
Gene3Di | 1.10.10.10, 2 hits |
InterProi | View protein in InterPro IPR009057, Homeobox-like_sf IPR043182, PAIRED_DNA_bd_dom IPR001523, Paired_dom IPR022130, Pax2_C IPR043565, PAX_fam IPR036388, WH-like_DNA-bd_sf |
PANTHERi | PTHR45636, PTHR45636, 1 hit |
Pfami | View protein in Pfam PF00292, PAX, 1 hit PF12403, Pax2_C, 1 hit |
PRINTSi | PR00027, PAIREDBOX |
SMARTi | View protein in SMART SM00351, PAX, 1 hit |
SUPFAMi | SSF46689, SSF46689, 1 hit |
PROSITEi | View protein in PROSITE PS00034, PAIRED_1, 1 hit PS51057, PAIRED_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | G1LU97_AILME | |
Accessioni | G1LU97Primary (citable) accession number: G1LU97 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | October 19, 2011 |
Last sequence update: | October 19, 2011 | |
Last modified: | August 12, 2020 | |
This is version 54 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |