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Protein
Submitted name:

Nucleoporin 50

Gene

NUP50

Organism
Ailuropoda melanoleuca (Giant panda)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Nucleoporin 50Imported
Gene namesi
Name:NUP50Imported
OrganismiAiluropoda melanoleuca (Giant panda)Imported
Taxonomic identifieri9646 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaUrsidaeAiluropoda
Proteomesi
  • UP000008912 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi9646.ENSAMEP00000009539

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini341 – 461RanBD1InterPro annotationAdd BLAST121

Phylogenomic databases

eggNOGiKOG2724 Eukaryota
ENOG410YPHB LUCA
GeneTreeiENSGT00440000035348
InParanoidiG1LR55
KOiK14295
OMAiTFLFHGN
OrthoDBiEOG091G0HML
TreeFamiTF106504

Family and domain databases

Gene3Di2.30.29.30, 1 hit
InterProiView protein in InterPro
IPR015007 NUP2/50/61
IPR011993 PH-like_dom_sf
IPR000156 Ran_bind_dom
PfamiView protein in Pfam
PF08911 NUP50, 1 hit
PF00638 Ran_BP1, 1 hit
SMARTiView protein in SMART
SM00160 RanBD, 1 hit
PROSITEiView protein in PROSITE
PS50196 RANBD1, 1 hit

Sequencei

Sequence statusi: Complete.

G1LR55-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKRVAEKEL TDRNWDQDDA AEEVGTFSVA SEEVLKNRAI KKAKRRNVGF
60 70 80 90 100
ESDSGGAFKG FKGLVVPSGG GGFSGFGNGA GGKPLEGLSN GSGVTSAPPF
110 120 130 140 150
SSARAATESK AAFGSVAANG PTSLVDKKIL TPKTNGDSQQ PSSSGLTSSA
160 170 180 190 200
ACPRNAYHKQ LAALNCSVRD WIAKHVDTNP LCDLTPIFKD YEKYLAGIEQ
210 220 230 240 250
QHGSSGSRSS ESETNKMPLA TQSPSLFGST KLQQDSPFPF AGNKVEDTSE
260 270 280 290 300
KKTDPSVGAA SASFNFGKKI DSSVLGSLNS GPLTGFSFSS GNSSLFGKDL
310 320 330 340 350
TQNKPVSSPF PTKTLEVHAE GGSSEYKGGD DEESDEPPKV VVTEVKEEDA
360 370 380 390 400
FYSKKCKLFY KKDNEFKEKG VGTLHLKPTA NQKTQLLVRA DTSLGNILLN
410 420 430 440 450
VLIPPNMPCT RTGKNNVLIV CVPNPPIDEK NATSPVTMLI RVKTGEDADE
460
LHTILLEKKD G
Length:461
Mass (Da):48,879
Last modified:October 19, 2011 - v1
Checksum:iBB6CE2442709E76E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACTA01168539 Genomic DNA No translation available.
RefSeqiXP_002922961.1, XM_002922915.3
XP_011227816.1, XM_011229514.2

Genome annotation databases

EnsembliENSAMET00000009951; ENSAMEP00000009539; ENSAMEG00000009067
GeneIDi100474401
KEGGiaml:100474401

Similar proteinsi

Entry informationi

Entry nameiG1LR55_AILME
AccessioniPrimary (citable) accession number: G1LR55
Entry historyiIntegrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: March 28, 2018
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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