UniProtKB - G1KNW8 (G1KNW8_ANOCA)
Protein
RRM domain-containing protein
Gene
TRA2A
Organism
Anolis carolinensis (Green anole) (American chameleon)
Status
Functioni
GO - Molecular functioni
- RNA binding Source: UniProtKB-UniRule
GO - Biological processi
- mRNA splicing, via spliceosome Source: Ensembl
- positive regulation of mRNA splicing, via spliceosome Source: GO_Central
Keywordsi
Molecular function | RNA-bindingPROSITE-ProRule annotation |
Names & Taxonomyi
Protein namesi | Recommended name: RRM domain-containing proteinInterPro annotation |
Gene namesi | Name:TRA2AImported |
Organismi | Anolis carolinensis (Green anole) (American chameleon)Imported |
Taxonomic identifieri | 28377 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Lepidosauria › Squamata › Bifurcata › Unidentata › Episquamata › Toxicofera › Iguania › Dactyloidae › Anolis |
Proteomesi |
|
Subcellular locationi
Nucleus
- nucleolus Source: Ensembl
- nucleoplasm Source: Ensembl
- spliceosomal complex Source: GO_Central
Expressioni
Gene expression databases
Bgeei | ENSACAG00000013502, Expressed in embryonic post-anal tail and 14 other tissues |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 119 – 197 | RRMInterPro annotationAdd BLAST | 79 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 116 | DisorderedSequence analysisAdd BLAST | 116 | |
Regioni | 201 – 241 | DisorderedSequence analysisAdd BLAST | 41 | |
Regioni | 258 – 280 | DisorderedSequence analysisAdd BLAST | 23 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 14 – 37 | PolarSequence analysisAdd BLAST | 24 | |
Compositional biasi | 50 – 86 | BasicSequence analysisAdd BLAST | 37 |
Phylogenomic databases
eggNOGi | KOG0118, Eukaryota |
GeneTreei | ENSGT00940000157167 |
HOGENOMi | CLU_050438_3_0_1 |
InParanoidi | G1KNW8 |
OMAi | HRSPPYG |
OrthoDBi | 1423983at2759 |
TreeFami | TF106265 |
Family and domain databases
Gene3Di | 3.30.70.330, 1 hit |
InterProi | View protein in InterPro IPR012677, Nucleotide-bd_a/b_plait_sf IPR035979, RBD_domain_sf IPR000504, RRM_dom |
Pfami | View protein in Pfam PF00076, RRM_1, 1 hit |
SMARTi | View protein in SMART SM00360, RRM, 1 hit |
SUPFAMi | SSF54928, SSF54928, 1 hit |
PROSITEi | View protein in PROSITE PS50102, RRM, 1 hit |
i Sequence
Sequence statusi: Complete.
G1KNW8-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSDVEENNFE GRESRSQSKS PAGSPARVKS ESRSGSRSPS RASKHSESRS
60 70 80 90 100
RSRSKSRSRS RRHSHRRYTR SRSHSHRRRS RSRSYTPEYR RRRSRSHSPM
110 120 130 140 150
SNRRRHTGSR VCANPDPNTC LGVFGLSLYT TERDLREVFS RYGPLSGVNV
160 170 180 190 200
VYDQRTGRSR GFAFVYFERI DDSKEAMEHA NGMELDGRRI RVDYSITKRA
210 220 230 240 250
HTPTPGIYMG RPTHSGGGGG GGGGGGGAGR RRDSYYDRGY DRGYDRYEEY
260 270 280
DYRYRRRSPS PYYSRYRSRS RSRSYSPRRY
Sequence databases
RefSeqi | XP_008110858.1, XM_008112651.2 |
Genome annotation databases
Ensembli | ENSACAT00000013554; ENSACAP00000013286; ENSACAG00000013502 |
GeneIDi | 100567661 |
Similar proteinsi
Cross-referencesi
Sequence databases
RefSeqi | XP_008110858.1, XM_008112651.2 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 28377.ENSACAP00000013286 |
Genome annotation databases
Ensembli | ENSACAT00000013554; ENSACAP00000013286; ENSACAG00000013502 |
GeneIDi | 100567661 |
Organism-specific databases
CTDi | 29896 |
Phylogenomic databases
eggNOGi | KOG0118, Eukaryota |
GeneTreei | ENSGT00940000157167 |
HOGENOMi | CLU_050438_3_0_1 |
InParanoidi | G1KNW8 |
OMAi | HRSPPYG |
OrthoDBi | 1423983at2759 |
TreeFami | TF106265 |
Gene expression databases
Bgeei | ENSACAG00000013502, Expressed in embryonic post-anal tail and 14 other tissues |
Family and domain databases
Gene3Di | 3.30.70.330, 1 hit |
InterProi | View protein in InterPro IPR012677, Nucleotide-bd_a/b_plait_sf IPR035979, RBD_domain_sf IPR000504, RRM_dom |
Pfami | View protein in Pfam PF00076, RRM_1, 1 hit |
SMARTi | View protein in SMART SM00360, RRM, 1 hit |
SUPFAMi | SSF54928, SSF54928, 1 hit |
PROSITEi | View protein in PROSITE PS50102, RRM, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | G1KNW8_ANOCA | |
Accessioni | G1KNW8Primary (citable) accession number: G1KNW8 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | October 19, 2011 |
Last sequence update: | June 26, 2013 | |
Last modified: | April 7, 2021 | |
This is version 50 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |