UniProtKB - G1KBM8 (G1KBM8_ANOCA)
Protein
RanBP2-type domain-containing protein
Gene
YAF2
Organism
Anolis carolinensis (Green anole) (American chameleon)
Status
Functioni
GO - Molecular functioni
- DNA binding Source: GO_Central
- metal ion binding Source: UniProtKB-KW
- transcription coactivator activity Source: Ensembl
- transcription coregulator activity Source: GO_Central
- transcription corepressor activity Source: Ensembl
GO - Biological processi
- negative regulation of transcription, DNA-templated Source: Ensembl
- positive regulation of transcription, DNA-templated Source: Ensembl
- regulation of transcription, DNA-templated Source: GO_Central
Keywordsi
Biological process | Transcription, Transcription regulationARBA annotation |
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Recommended name: RanBP2-type domain-containing proteinInterPro annotation |
Gene namesi | Name:YAF2Imported |
Organismi | Anolis carolinensis (Green anole) (American chameleon)Imported |
Taxonomic identifieri | 28377 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Lepidosauria › Squamata › Bifurcata › Unidentata › Episquamata › Toxicofera › Iguania › Dactyloidae › Anolis |
Proteomesi |
|
Subcellular locationi
Nucleus
- Nucleus ARBA annotation
Cytosol
- cytosol Source: Ensembl
Nucleus
- nucleoplasm Source: Ensembl
- nucleus Source: GO_Central
Expressioni
Gene expression databases
Bgeei | ENSACAG00000003204, Expressed in brain and 14 other tissues |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 19 – 48 | RanBP2-typeInterPro annotationAdd BLAST | 30 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 24 | DisorderedSequence analysisAdd BLAST | 24 | |
Regioni | 47 – 180 | DisorderedSequence analysisAdd BLAST | 134 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 1 – 18 | PolyampholyteSequence analysisAdd BLAST | 18 | |
Compositional biasi | 51 – 72 | PolarSequence analysisAdd BLAST | 22 | |
Compositional biasi | 73 – 95 | PolyampholyteSequence analysisAdd BLAST | 23 | |
Compositional biasi | 134 – 180 | PolarSequence analysisAdd BLAST | 47 |
Keywords - Domaini
Zinc-fingerPROSITE-ProRule annotationARBA annotationPhylogenomic databases
eggNOGi | KOG4477, Eukaryota |
GeneTreei | ENSGT00390000013995 |
HOGENOMi | CLU_095374_0_1_1 |
InParanoidi | G1KBM8 |
OMAi | SKKNCHK |
OrthoDBi | 1634090at2759 |
TreeFami | TF350501 |
Family and domain databases
InterProi | View protein in InterPro IPR039958, RYBP/YAF2 IPR038039, YAF2 IPR033774, YAF2_RYBP IPR001876, Znf_RanBP2 IPR036443, Znf_RanBP2_sf |
PANTHERi | PTHR12920, PTHR12920, 1 hit PTHR12920:SF2, PTHR12920:SF2, 1 hit |
Pfami | View protein in Pfam PF17219, YAF2_RYBP, 1 hit PF00641, zf-RanBP, 1 hit |
SMARTi | View protein in SMART SM00547, ZnF_RBZ, 1 hit |
SUPFAMi | SSF90209, SSF90209, 1 hit |
PROSITEi | View protein in PROSITE PS01358, ZF_RANBP2_1, 1 hit PS50199, ZF_RANBP2_2, 1 hit |
i Sequence
Sequence statusi: Complete.
G1KBM8-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MGDKKSPTRP KRQPKPSSDE GYWDCSVCTF RNSAEAFKCM MCDVRKGTST
60 70 80 90 100
RKPRPVSQLV AQQVTQQFVP PTQSKKEKKD KVEKEKNEKE PASKKNSHKK
110 120 130 140 150
TRPRLKNVDR SSAQHLEVTV GDLTVIITDF KEKTKSPPAS SAASADQHSQ
160 170 180
SGSSSDNTER GMSRSSSPRG EASSLNGESH
Sequence databases
RefSeqi | XP_003221243.1, XM_003221195.3 |
Genome annotation databases
Ensembli | ENSACAT00000003182; ENSACAP00000003103; ENSACAG00000003204 |
GeneIDi | 100557425 |
KEGGi | acs:100557425 |
Similar proteinsi
Cross-referencesi
Sequence databases
RefSeqi | XP_003221243.1, XM_003221195.3 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 28377.ENSACAP00000003103 |
Genome annotation databases
Ensembli | ENSACAT00000003182; ENSACAP00000003103; ENSACAG00000003204 |
GeneIDi | 100557425 |
KEGGi | acs:100557425 |
Organism-specific databases
CTDi | 10138 |
Phylogenomic databases
eggNOGi | KOG4477, Eukaryota |
GeneTreei | ENSGT00390000013995 |
HOGENOMi | CLU_095374_0_1_1 |
InParanoidi | G1KBM8 |
OMAi | SKKNCHK |
OrthoDBi | 1634090at2759 |
TreeFami | TF350501 |
Gene expression databases
Bgeei | ENSACAG00000003204, Expressed in brain and 14 other tissues |
Family and domain databases
InterProi | View protein in InterPro IPR039958, RYBP/YAF2 IPR038039, YAF2 IPR033774, YAF2_RYBP IPR001876, Znf_RanBP2 IPR036443, Znf_RanBP2_sf |
PANTHERi | PTHR12920, PTHR12920, 1 hit PTHR12920:SF2, PTHR12920:SF2, 1 hit |
Pfami | View protein in Pfam PF17219, YAF2_RYBP, 1 hit PF00641, zf-RanBP, 1 hit |
SMARTi | View protein in SMART SM00547, ZnF_RBZ, 1 hit |
SUPFAMi | SSF90209, SSF90209, 1 hit |
PROSITEi | View protein in PROSITE PS01358, ZF_RANBP2_1, 1 hit PS50199, ZF_RANBP2_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | G1KBM8_ANOCA | |
Accessioni | G1KBM8Primary (citable) accession number: G1KBM8 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | October 19, 2011 |
Last sequence update: | October 19, 2011 | |
Last modified: | December 2, 2020 | |
This is version 54 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |