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Protein
Submitted name:

CPXV099 protein

Gene

CPXV099

Organism
Cowpox virus (CPV)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
CPXV099 proteinImported
Submitted name:
IMV membrane proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:CPXV099Imported
Synonyms:N1RImported
ORF Names:CPXV099Imported, CPXV_AUS1999_867_093Imported, CPXV_GER1980_EP4_093Imported, CPXV_GER1998_2_093Imported, CPXV_GER2002_MKY_093Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCowpox virus (CPV)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10243 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiVirusesdsDNA viruses, no RNA stagePoxviridaeChordopoxvirinaeOrthopoxvirus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section only exists in viral entries and indicates the host(s) either as a specific organism or taxonomic group of organisms that are susceptible to be infected by a virus.<p><a href='/help/virus_host' target='_top'>More...</a></p>Virus hostiApodemus sylvaticus (European woodmouse) [TaxID: 10129]
Bos taurus (Bovine) [TaxID: 9913]
Felis catus (Cat) (Felis silvestris catus) [TaxID: 9685]
Homo sapiens (Human) [TaxID: 9606]
Loxodonta africana (African elephant) [TaxID: 9785]
Microtus agrestis (Short-tailed field vole) [TaxID: 29092]
Mus musculus (Mouse) [TaxID: 10090]
Myodes glareolus (Bank vole) (Clethrionomys glareolus) [TaxID: 447135]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei186 – 204HelicalSequence analysisAdd BLAST19

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Cellular componenti

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR003472 Virion_mem_poxvirus_L1

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF02442 L1R_F9L, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

G0XSI3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGAAASIQTT VNTLSERISS KLEQEANASA QTKCDIEIGN FYIRQNHGCN
60 70 80 90 100
LTVKNMCSAD ADAQLDAVLS AATETYSGLT PEQKAYVPAM FTAALNIQTS
110 120 130 140 150
VNTVVRDFEN YVKQTCNSSA VVDNKLKIQN VIIDECYGAP GSPTNLEFIN
160 170 180 190 200
TGSSKGNCAI KALMQLTTKA TTQIAPRQVA GTGVQFYMIV IGVIILAALF
210 220 230 240 250
MYYAKRMLFT STNDKIKLIL ANKENVHWTT YMDTFFRTSP MVIATTDMQN
Length:250
Mass (Da):27,307
Last modified:October 19, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i28E1ABB817410A2D
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
HQ407377 Genomic DNA Translation: ADZ24097.1
HQ420895 Genomic DNA Translation: ADZ29638.1
HQ420897 Genomic DNA Translation: ADZ30067.1
HQ420898 Genomic DNA Translation: ADZ30281.1
KC813491 Genomic DNA Translation: AGY97121.1
KC813492 Genomic DNA Translation: AGY97336.1
KC813493 Genomic DNA Translation: AGY97552.1
KC813495 Genomic DNA Translation: AGY97990.1
KC813496 Genomic DNA Translation: AGY98197.1
KC813497 Genomic DNA Translation: AGY98410.1
KC813498 Genomic DNA Translation: AGY98626.1
KC813500 Genomic DNA Translation: AGY99061.1
KC813501 Genomic DNA Translation: AGY99269.1
KC813502 Genomic DNA Translation: AGY99473.1
KC813503 Genomic DNA Translation: AGY99688.1
KC813504 Genomic DNA Translation: AGY99901.1
KC813505 Genomic DNA Translation: AGZ00118.1
KC813506 Genomic DNA Translation: AGZ00331.1
KC813507 Genomic DNA Translation: AGZ00543.1
KC813508 Genomic DNA Translation: AGZ00750.1
KC813509 Genomic DNA Translation: AGZ00960.1
KC813510 Genomic DNA Translation: AGZ01171.1
KC813511 Genomic DNA Translation: AGZ01385.1
KC813512 Genomic DNA Translation: AGZ01594.1
KY463519 Genomic DNA Translation: ARB50322.1
KY549146 Genomic DNA Translation: ARR30201.1
KY549147 Genomic DNA Translation: ARR30310.1
LN864565 Genomic DNA Translation: CRL86563.1
LN879483 Genomic DNA Translation: CUI02337.1
LT896730 Genomic DNA Translation: SNB48244.1
LT896719 Genomic DNA Translation: SNB48872.1
LT896718 Genomic DNA Translation: SNB50066.1
LT896729 Genomic DNA Translation: SNB50109.1
LT896726 Genomic DNA Translation: SNB50240.1
LT896731 Genomic DNA Translation: SNB50375.1
LT896728 Genomic DNA Translation: SNB52858.1
LT896720 Genomic DNA Translation: SNB53333.1
LT896727 Genomic DNA Translation: SNB68914.1
LT993228 Genomic DNA Translation: SPN68192.1
LT993230 Genomic DNA Translation: SPN68471.1
LT993231 Genomic DNA Translation: SPN68752.1
LT993232 Genomic DNA Translation: SPN69033.1
LT896732 Genomic DNA Translation: SPQ84284.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HQ407377 Genomic DNA Translation: ADZ24097.1
HQ420895 Genomic DNA Translation: ADZ29638.1
HQ420897 Genomic DNA Translation: ADZ30067.1
HQ420898 Genomic DNA Translation: ADZ30281.1
KC813491 Genomic DNA Translation: AGY97121.1
KC813492 Genomic DNA Translation: AGY97336.1
KC813493 Genomic DNA Translation: AGY97552.1
KC813495 Genomic DNA Translation: AGY97990.1
KC813496 Genomic DNA Translation: AGY98197.1
KC813497 Genomic DNA Translation: AGY98410.1
KC813498 Genomic DNA Translation: AGY98626.1
KC813500 Genomic DNA Translation: AGY99061.1
KC813501 Genomic DNA Translation: AGY99269.1
KC813502 Genomic DNA Translation: AGY99473.1
KC813503 Genomic DNA Translation: AGY99688.1
KC813504 Genomic DNA Translation: AGY99901.1
KC813505 Genomic DNA Translation: AGZ00118.1
KC813506 Genomic DNA Translation: AGZ00331.1
KC813507 Genomic DNA Translation: AGZ00543.1
KC813508 Genomic DNA Translation: AGZ00750.1
KC813509 Genomic DNA Translation: AGZ00960.1
KC813510 Genomic DNA Translation: AGZ01171.1
KC813511 Genomic DNA Translation: AGZ01385.1
KC813512 Genomic DNA Translation: AGZ01594.1
KY463519 Genomic DNA Translation: ARB50322.1
KY549146 Genomic DNA Translation: ARR30201.1
KY549147 Genomic DNA Translation: ARR30310.1
LN864565 Genomic DNA Translation: CRL86563.1
LN879483 Genomic DNA Translation: CUI02337.1
LT896730 Genomic DNA Translation: SNB48244.1
LT896719 Genomic DNA Translation: SNB48872.1
LT896718 Genomic DNA Translation: SNB50066.1
LT896729 Genomic DNA Translation: SNB50109.1
LT896726 Genomic DNA Translation: SNB50240.1
LT896731 Genomic DNA Translation: SNB50375.1
LT896728 Genomic DNA Translation: SNB52858.1
LT896720 Genomic DNA Translation: SNB53333.1
LT896727 Genomic DNA Translation: SNB68914.1
LT993228 Genomic DNA Translation: SPN68192.1
LT993230 Genomic DNA Translation: SPN68471.1
LT993231 Genomic DNA Translation: SPN68752.1
LT993232 Genomic DNA Translation: SPN69033.1
LT896732 Genomic DNA Translation: SPQ84284.1

3D structure databases

Database of comparative protein structure models

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ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiView protein in InterPro
IPR003472 Virion_mem_poxvirus_L1
PfamiView protein in Pfam
PF02442 L1R_F9L, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiG0XSI3_COWPX
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: G0XSI3
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: December 5, 2018
This is version 36 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
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Main funding by: National Institutes of Health

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