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Protein
Submitted name:

Uncharacterized protein

Gene

CAEBREN_32188

Organism
Caenorhabditis brenneri (Nematode worm)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CAEBREN_32188Imported
OrganismiCaenorhabditis brenneri (Nematode worm)Imported
Taxonomic identifieri135651 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000008068 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi135651.CBN32188

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 218RTCInterPro annotationAdd BLAST211

Phylogenomic databases

eggNOGiKOG3980 Eukaryota
COG0430 LUCA
InParanoidiG0PMP6
OrthoDBiEOG091G092A

Family and domain databases

Gene3Di3.65.10.20, 1 hit
InterProiView protein in InterPro
IPR023797 RNA3'_phos_cyclase_dom
IPR037136 RNA3'_phos_cyclase_dom_sf
IPR000228 RNA3'_term_phos_cyc
IPR016443 RNA3'_term_phos_cyc_type_2
IPR013792 RNA3'P_cycl/enolpyr_Trfase_a/b
PANTHERiPTHR11096 PTHR11096, 2 hits
PTHR11096:SF1 PTHR11096:SF1, 2 hits
PfamiView protein in Pfam
PF01137 RTC, 1 hit
SUPFAMiSSF55205 SSF55205, 1 hit

Sequencei

Sequence statusi: Complete.

G0PMP6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSSETLEFSG CNFFRLRLAY SILSGRPIRI VSIRKNDDRP GIRDFEAKLI
60 70 80 90 100
GMLEKVTNGT KVEISRTGTQ VNFRPGMITG GVVTVDCGAE RCISYFLEPL
110 120 130 140 150
ILLSPFCKLA MTIKLKGVTN SPDEISVDGI KASWLKVYNK FVLNDEKLDI
160 170 180 190 200
QIQCRGLKPE GGAKFTGWAL DSSAQVLAST FMTLCPKDVS HFLYGPLPMY
210 220 230 240 250
SVHCLRHLKQ FFEIEFKMEE YQKIQKNEDA DLRTGSSDKA MITAVGVGYS

NLNKTIL
Length:257
Mass (Da):28,742
Last modified:October 19, 2011 - v1
Checksum:iF652679E696DBB3A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL381468 Genomic DNA Translation: EGT38094.1

Genome annotation databases

EnsemblMetazoaiCBN32188; CBN32188; WBGene00194153

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL381468 Genomic DNA Translation: EGT38094.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi135651.CBN32188

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiCBN32188; CBN32188; WBGene00194153

Phylogenomic databases

eggNOGiKOG3980 Eukaryota
COG0430 LUCA
InParanoidiG0PMP6
OrthoDBiEOG091G092A

Family and domain databases

Gene3Di3.65.10.20, 1 hit
InterProiView protein in InterPro
IPR023797 RNA3'_phos_cyclase_dom
IPR037136 RNA3'_phos_cyclase_dom_sf
IPR000228 RNA3'_term_phos_cyc
IPR016443 RNA3'_term_phos_cyc_type_2
IPR013792 RNA3'P_cycl/enolpyr_Trfase_a/b
PANTHERiPTHR11096 PTHR11096, 2 hits
PTHR11096:SF1 PTHR11096:SF1, 2 hits
PfamiView protein in Pfam
PF01137 RTC, 1 hit
SUPFAMiSSF55205 SSF55205, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiG0PMP6_CAEBE
AccessioniPrimary (citable) accession number: G0PMP6
Entry historyiIntegrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: November 7, 2018
This is version 26 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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