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Protein
Submitted name:

CBN-NHR-14 protein

Gene

Cbn-nhr-14

Organism
Caenorhabditis brenneri (Nematode worm)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi17 – 92Nuclear receptorPROSITE-ProRule annotationAdd BLAST76

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation, ReceptorUniRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
CBN-NHR-14 proteinImported
Gene namesi
Name:Cbn-nhr-14Imported
ORF Names:CAEBREN_08474Imported
OrganismiCaenorhabditis brenneri (Nematode worm)Imported
Taxonomic identifieri135651 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000008068 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini17 – 92Nuclear receptorInterPro annotationAdd BLAST76
Domaini131 – 355NR LBDInterPro annotationAdd BLAST225

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.UniRule annotationSAAS annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG4215 Eukaryota
ENOG410XQT8 LUCA
InParanoidiG0NN96
OMAiNIDKDHR
OrthoDBiEOG091G0A89

Family and domain databases

Gene3Di3.30.50.10, 1 hit
InterProiView protein in InterPro
IPR035500 NHR_like_dom_sf
IPR000536 Nucl_hrmn_rcpt_lig-bd
IPR001723 Nuclear_hrmn_rcpt
IPR001628 Znf_hrmn_rcpt
IPR013088 Znf_NHR/GATA
PfamiView protein in Pfam
PF00104 Hormone_recep, 1 hit
PF00105 zf-C4, 1 hit
PRINTSiPR00398 STRDHORMONER
PR00047 STROIDFINGER
SMARTiView protein in SMART
SM00430 HOLI, 1 hit
SM00399 ZnF_C4, 1 hit
SUPFAMiSSF48508 SSF48508, 1 hit
PROSITEiView protein in PROSITE
PS51843 NR_LBD, 1 hit
PS00031 NUCLEAR_REC_DBD_1, 1 hit
PS51030 NUCLEAR_REC_DBD_2, 1 hit

Sequencei

Sequence statusi: Complete.

G0NN96-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDFLMSTSLS ESTSTSADFC VVCGDKAIGK HYGAVACNGC KGFFRRSVWQ
60 70 80 90 100
NLQYTCRFNK QCNIDKDHRN ACRYCRFQKC LADGMKPEAI QNERDRIGST
110 120 130 140 150
KRRKRSGANS ENNSDSEGTP SPKIEVMGNS VSRKLIEMLL DIEHRLASNQ
160 170 180 190 200
SMNALLRDES EMKNSRQRAV NYLIGWTNML HPLPEVPLAD KLLLLKKFSS
210 220 230 240 250
AFTLLGTMQR SMALPHFVLP NDQVLSVSPT HPPELFEALT RIIDELLTPL
260 270 280 290 300
RRLRTDHAEF SCLKALLLLN PDVVGISTGT RDRIRESRDA LLKALFAYMS
310 320 330 340 350
NTQSSLEASL RVSSLLMIIP SLISVSATIM EFPALSDLFG LGDVIKRESN
360 370 380 390 400
SPKVESPPLE MKVMIPKVQP PPVVTSVADT VSTNMIMNKD LISQIINNPQ
410 420 430
LFPLLPLPPT SSPPLSFMGQ SEFGPPHHFQ PMPVKVILS
Length:439
Mass (Da):48,902
Last modified:October 19, 2011 - v1
Checksum:iE5466FD130062F25
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL379913 Genomic DNA Translation: EGT34452.1

Genome annotation databases

EnsemblMetazoaiCBN08474; CBN08474; WBGene00147199

Similar proteinsi

Entry informationi

Entry nameiG0NN96_CAEBE
AccessioniPrimary (citable) accession number: G0NN96
Entry historyiIntegrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: May 23, 2018
This is version 47 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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