UniProtKB - G0L8U2 (G0L8U2_ZOBGA)
Protein
Submitted name:
Ribosomal RNA small subunit methyltransferase B
Gene
rsmB
Organism
Zobellia galactanivorans (strain DSM 12802 / CCUG 47099 / CIP 106680 / NCIMB 13871 / Dsij)
Status
Functioni
Caution
Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Binding sitei | 256 | S-adenosyl-L-methioninePROSITE-ProRule annotation | 1 | |
Binding sitei | 283 | S-adenosyl-L-methioninePROSITE-ProRule annotation | 1 | |
Binding sitei | 301 | S-adenosyl-L-methioninePROSITE-ProRule annotation | 1 | |
Active sitei | 354 | NucleophilePROSITE-ProRule annotation | 1 |
GO - Molecular functioni
- methyltransferase activity Source: UniProtKB-KW
- RNA binding Source: UniProtKB-UniRule
GO - Biological processi
- RNA methylation Source: InterPro
Keywordsi
Molecular function | MethyltransferasePROSITE-ProRule annotationImportedARBA annotation, RNA-bindingPROSITE-ProRule annotationARBA annotation, Transferase |
Ligand | S-adenosyl-L-methioninePROSITE-ProRule annotationARBA annotation |
Names & Taxonomyi
Protein namesi | |
Gene namesi | Name:rsmBImported Ordered Locus Names:zobellia_91Imported |
Organismi | Zobellia galactanivorans (strain DSM 12802 / CCUG 47099 / CIP 106680 / NCIMB 13871 / Dsij)Imported |
Taxonomic identifieri | 63186 [NCBI] |
Taxonomic lineagei | Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Zobellia |
Proteomesi |
|
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 142 – 403 | SAM_MT_RSMB_NOPInterPro annotationAdd BLAST | 262 |
Sequence similaritiesi
Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.PROSITE-ProRule annotation
Phylogenomic databases
HOGENOMi | CLU_005316_0_2_10 |
OMAi | PDAKWKL |
OrthoDBi | 1064993at2 |
Family and domain databases
InterProi | View protein in InterPro IPR001678, MeTrfase_RsmB/NOP2 IPR023267, RCMT IPR029063, SAM-dependent_MTases |
Pfami | View protein in Pfam PF01189, Methyltr_RsmB-F, 1 hit |
PRINTSi | PR02008, RCMTFAMILY |
SUPFAMi | SSF53335, SSF53335, 1 hit |
PROSITEi | View protein in PROSITE PS51686, SAM_MT_RSMB_NOP, 1 hit |
i Sequence
Sequence statusi: Complete.
G0L8U2-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MKLHRNLVFA VIDALNLIFN EGEYADKVVQ KVLKFDKRWG ARDRGFIAET
60 70 80 90 100
TYEMVRYKRL YTEIAEVKAP FSRPDLFRMW AVWAVLKGIK LPDWKQLEPT
110 120 130 140 150
PERRIKGRFD ELSKIRKYRE SLPDWIDEIC LKALGEKLWN EESAALNQQA
160 170 180 190 200
EVILRTNTLK TKKETLRKAL LDEGIVAEPI KGYADALRLP ERANVFVTES
210 220 230 240 250
FKKGYFEVQD ASSQLVAAYL DVKPGQRVVD TCAGAGGKSL HLAALMENKG
260 270 280 290 300
QLIAMDIYGS KLKELKRRAR RNNAHNIETR EIDSTKVYKK LYGSADRVLI
310 320 330 340 350
DAPCTGLGVL RRNPDSKWKM QPEFLEKITK TQHEIIRNYS KIVKPGGKMV
360 370 380 390 400
YATCSILPQE NNDQVQSFLA SEEGKDFSLV KEKKIYASKS GFDGFYMALL
EKK
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | FP476056 Genomic DNA Translation: CAZ94164.1 |
RefSeqi | WP_013991477.1, NC_015844.1 |
Genome annotation databases
EnsemblBacteriai | CAZ94164; CAZ94164; ZOBELLIA_91 |
KEGGi | zga:ZOBELLIA_91 |
PATRICi | fig|63186.3.peg.95 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | FP476056 Genomic DNA Translation: CAZ94164.1 |
RefSeqi | WP_013991477.1, NC_015844.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
EnsemblBacteriai | CAZ94164; CAZ94164; ZOBELLIA_91 |
KEGGi | zga:ZOBELLIA_91 |
PATRICi | fig|63186.3.peg.95 |
Phylogenomic databases
HOGENOMi | CLU_005316_0_2_10 |
OMAi | PDAKWKL |
OrthoDBi | 1064993at2 |
Family and domain databases
InterProi | View protein in InterPro IPR001678, MeTrfase_RsmB/NOP2 IPR023267, RCMT IPR029063, SAM-dependent_MTases |
Pfami | View protein in Pfam PF01189, Methyltr_RsmB-F, 1 hit |
PRINTSi | PR02008, RCMTFAMILY |
SUPFAMi | SSF53335, SSF53335, 1 hit |
PROSITEi | View protein in PROSITE PS51686, SAM_MT_RSMB_NOP, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | G0L8U2_ZOBGA | |
Accessioni | G0L8U2Primary (citable) accession number: G0L8U2 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | October 19, 2011 |
Last sequence update: | October 19, 2011 | |
Last modified: | December 2, 2020 | |
This is version 38 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |