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Protein
Submitted name:

RNA-binding protein MEX3B

Gene

Mex3b

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
RNA-binding protein MEX3BImported
Gene namesi
Name:Mex3bImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:1918252 Mex3b

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

MaxQBiF8WJD6
PeptideAtlasiF8WJD6
PRIDEiF8WJD6

Expressioni

Gene expression databases

BgeeiENSMUSG00000057706 Expressed in 216 organ(s), highest expression level in manus
GenevisibleiF8WJD6 MM

Structurei

3D structure databases

ProteinModelPortaliF8WJD6
SMRiF8WJD6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini525 – 565RING-typeInterPro annotationAdd BLAST41

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG2113 Eukaryota
ENOG410YCYR LUCA
GeneTreeiENSGT00390000018714
KOiK15686
OMAiLHPGASC
OrthoDBiEOG091G06LE
TreeFamiTF315107

Family and domain databases

Gene3Di3.30.1370.10, 2 hits
3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR004087 KH_dom
IPR004088 KH_dom_type_1
IPR036612 KH_dom_type_1_sf
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF00013 KH_1, 2 hits
SMARTiView protein in SMART
SM00322 KH, 2 hits
SM00184 RING, 1 hit
SUPFAMiSSF54791 SSF54791, 2 hits
PROSITEiView protein in PROSITE
PS50089 ZF_RING_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

F8WJD6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPSSLFADLE RNGSGGGGGG GGGGGGGGSG GGETLDDQRA LQLALDQLSL
60 70 80 90 100
LGLDSDEGAS LYDSEPRKKS VNMTECVPVP SSEHVAEIVG RQGCKIKALR
110 120 130 140 150
AKTNTYIKTP VRGEEPVFVV TGRKEDVAMA RREIISAAEH FSMIRASRNK
160 170 180 190 200
NTALNGAVPG PPNLPGQTTI QVRVPYRVVG LVVGPKGATI KRIQQQTHTY
210 220 230 240 250
IVTPSRDKEP VFEVTGMPEN VDRAREEIEA HIALRTGGII ELTDENDFHA
260 270 280 290 300
NGTDVGFDLH HGSGGSGPGS LWSKPTPSIT PTPGRKPFSS YRNDSSSSLG
310 320 330 340 350
SASTDSYFGG GTSGSAAATS RLADYSPPSP ALSFAHNGNN NNNGNGYTYT
360 370 380 390 400
AGEASVPSPD GGPELQPTFD PAPAPPPGTP LLWAQFERSP GGGSAAPVSS
410 420 430 440 450
SCSSSASSSA SSSSVVFPGG GASSTPSNAN LGLLVHRRLH PGTSCPRLSP
460 470 480 490 500
PLHMATGAGE HHLARRVRSD PGGGGLAYAA YANGLGTQLP GLPSSDTSGS
510 520 530 540 550
SSSSSSSSSS SSSSSGLRRK GSRDCSVCFE SEVIAALVPC GHNLFCMECA
560 570
NRICEKSEPE CPVCHTAVTQ AIRIFS
Length:576
Mass (Da):59,157
Last modified:September 21, 2011 - v1
Checksum:iD347A5A96DA2D797
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q69Z36MEX3B_MOUSE
RNA-binding protein MEX3B
Mex3b Kiaa2009, Rkhd3
601Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC122736 Genomic DNA No translation available.
RefSeqiNP_780575.2, NM_175366.3
UniGeneiMm.306789

Genome annotation databases

EnsembliENSMUST00000082237; ENSMUSP00000082168; ENSMUSG00000057706
GeneIDi108797
KEGGimmu:108797
UCSCiuc009idj.2 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC122736 Genomic DNA No translation available.
RefSeqiNP_780575.2, NM_175366.3
UniGeneiMm.306789

3D structure databases

ProteinModelPortaliF8WJD6
SMRiF8WJD6
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiF8WJD6
PeptideAtlasiF8WJD6
PRIDEiF8WJD6

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000082237; ENSMUSP00000082168; ENSMUSG00000057706
GeneIDi108797
KEGGimmu:108797
UCSCiuc009idj.2 mouse

Organism-specific databases

CTDi84206
MGIiMGI:1918252 Mex3b

Phylogenomic databases

eggNOGiKOG2113 Eukaryota
ENOG410YCYR LUCA
GeneTreeiENSGT00390000018714
KOiK15686
OMAiLHPGASC
OrthoDBiEOG091G06LE
TreeFamiTF315107

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000057706 Expressed in 216 organ(s), highest expression level in manus
GenevisibleiF8WJD6 MM

Family and domain databases

Gene3Di3.30.1370.10, 2 hits
3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR004087 KH_dom
IPR004088 KH_dom_type_1
IPR036612 KH_dom_type_1_sf
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF00013 KH_1, 2 hits
SMARTiView protein in SMART
SM00322 KH, 2 hits
SM00184 RING, 1 hit
SUPFAMiSSF54791 SSF54791, 2 hits
PROSITEiView protein in PROSITE
PS50089 ZF_RING_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF8WJD6_MOUSE
AccessioniPrimary (citable) accession number: F8WJD6
Entry historyiIntegrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: November 7, 2018
This is version 61 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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