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Protein
Submitted name:

Calcium-binding and coiled-coil domain-containing protein 1

Gene

CALCOCO1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Calcium-binding and coiled-coil domain-containing protein 1Imported
Gene namesi
Name:CALCOCO1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 12

Organism-specific databases

EuPathDBiHostDB:ENSG00000012822.15
HGNCiHGNC:29306 CALCOCO1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000012822

PTM / Processingi

Proteomic databases

PeptideAtlasiF8VXS2
PRIDEiF8VXS2

Expressioni

Gene expression databases

BgeeiENSG00000012822 Expressed in 230 organ(s), highest expression level in esophagus
ExpressionAtlasiF8VXS2 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliF8VXS2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 87CALCOCO1InterPro annotationAdd BLAST74
Domaini106 – 159CALCOCO1InterPro annotationAdd BLAST54

Phylogenomic databases

GeneTreeiENSGT00530000063216

Family and domain databases

InterProiView protein in InterPro
IPR012852 CALCOCO1-like
PfamiView protein in Pfam
PF07888 CALCOCO1, 2 hits

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 9 potential isoforms that are computationally mapped.Show allAlign All

F8VXS2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEESPLSRAP SRGGVNFLNV ARTYIPNTKV ECHYTLPPGT MPSASDWIGI
60 70 80 90 100
FKVEAACVRD YHTFVWSSVP ESTTDGSPIH TSVQFQGTRE DGKLGERSQG
110 120 130 140 150
SGGLKEASYL PKPGAQLYQF RYVNRQGQVC GQSPPFQFRE PRPMDELVTL
160
EEADGGSDIL
Length:160
Mass (Da):17,628
Last modified:October 5, 2016 - v8
Checksum:i2B7F698A817FF965
GO

Computationally mapped potential isoform sequencesi

There are 9 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q9P1Z2CACO1_HUMAN
Calcium-binding and coiled-coil dom...
CALCOCO1 KIAA1536, PP13275, UNQ2436/PRO4996
691Annotation score:
H3BRW8H3BRW8_HUMAN
Calcium-binding and coiled-coil dom...
CALCOCO1
232Annotation score:
F8W0X2F8W0X2_HUMAN
Calcium-binding and coiled-coil dom...
CALCOCO1
149Annotation score:
F8VQE3F8VQE3_HUMAN
Calcium-binding and coiled-coil dom...
CALCOCO1
164Annotation score:
F8VUB3F8VUB3_HUMAN
Calcium-binding and coiled-coil dom...
CALCOCO1
120Annotation score:
F8VZI3F8VZI3_HUMAN
Calcium-binding and coiled-coil dom...
CALCOCO1
134Annotation score:
F8VPN1F8VPN1_HUMAN
Calcium-binding and coiled-coil dom...
CALCOCO1
115Annotation score:
F8VWP8F8VWP8_HUMAN
Calcium-binding and coiled-coil dom...
CALCOCO1
104Annotation score:
F8VRQ9F8VRQ9_HUMAN
Calcium-binding and coiled-coil dom...
CALCOCO1
159Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei160Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC076968 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000549173; ENSP00000449058; ENSG00000012822
UCSCiuc058ota.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC076968 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliF8VXS2
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiF8VXS2
PRIDEiF8VXS2

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000549173; ENSP00000449058; ENSG00000012822
UCSCiuc058ota.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000012822.15
HGNCiHGNC:29306 CALCOCO1
OpenTargetsiENSG00000012822
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00530000063216

Miscellaneous databases

ChiTaRSiCALCOCO1 human

Gene expression databases

BgeeiENSG00000012822 Expressed in 230 organ(s), highest expression level in esophagus
ExpressionAtlasiF8VXS2 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR012852 CALCOCO1-like
PfamiView protein in Pfam
PF07888 CALCOCO1, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiF8VXS2_HUMAN
AccessioniPrimary (citable) accession number: F8VXS2
Entry historyiIntegrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: October 5, 2016
Last modified: September 12, 2018
This is version 47 of the entry and version 8 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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