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Protein
Submitted name:

Zinc finger CCCH type-containing 7B

Gene

Zc3h7b

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri485 – 509C3H1-typePROSITE-ProRule annotationAdd BLAST25
Zinc fingeri617 – 639C3H1-typePROSITE-ProRule annotationAdd BLAST23
Zinc fingeri755 – 783C3H1-typePROSITE-ProRule annotationAdd BLAST29
Zinc fingeri887 – 915C3H1-typePROSITE-ProRule annotationAdd BLAST29

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger CCCH type-containing 7BImported
Gene namesi
Name:Zc3h7bImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 15

Organism-specific databases

MGIiMGI:1328310 Zc3h7b

PTM / Processingi

Proteomic databases

MaxQBiF8VPP8
PaxDbiF8VPP8
PeptideAtlasiF8VPP8
PRIDEiF8VPP8

Expressioni

Gene expression databases

BgeeiENSMUSG00000022390 Expressed in 242 organ(s), highest expression level in brain
GenevisibleiF8VPP8 MM

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000105181

Structurei

3D structure databases

ProteinModelPortaliF8VPP8
SMRiF8VPP8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati36 – 69TPRPROSITE-ProRule annotationAdd BLAST34
Domaini82 – 149TPR_REGIONInterPro annotationAdd BLAST68
Repeati82 – 115TPRPROSITE-ProRule annotationAdd BLAST34
Domaini485 – 509C3H1-typeInterPro annotationAdd BLAST25
Domaini617 – 639C3H1-typeInterPro annotationAdd BLAST23
Domaini755 – 783C3H1-typeInterPro annotationAdd BLAST29
Domaini887 – 915C3H1-typeInterPro annotationAdd BLAST29

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili917 – 937Sequence analysisAdd BLAST21

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri485 – 509C3H1-typePROSITE-ProRule annotationAdd BLAST25
Zinc fingeri617 – 639C3H1-typePROSITE-ProRule annotationAdd BLAST23
Zinc fingeri755 – 783C3H1-typePROSITE-ProRule annotationAdd BLAST29
Zinc fingeri887 – 915C3H1-typePROSITE-ProRule annotationAdd BLAST29

Keywords - Domaini

Coiled coilSequence analysis, TPR repeatPROSITE-ProRule annotation, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IN1T Eukaryota
ENOG410YBKB LUCA
GeneTreeiENSGT00390000018542
InParanoidiF8VPP8
OMAiACYSRIG
OrthoDBiEOG091G02K0
TreeFamiTF329017

Family and domain databases

Gene3Di1.25.40.10, 1 hit
InterProiView protein in InterPro
IPR013026 TPR-contain_dom
IPR011990 TPR-like_helical_dom_sf
IPR019734 TPR_repeat
IPR039691 ZC3H7A/B
IPR036236 Znf_C2H2_sf
IPR000571 Znf_CCCH
IPR036855 Znf_CCCH_sf
PANTHERiPTHR14928 PTHR14928, 1 hit
PfamiView protein in Pfam
PF00642 zf-CCCH, 2 hits
SMARTiView protein in SMART
SM00028 TPR, 2 hits
SM00356 ZnF_C3H1, 4 hits
SUPFAMiSSF48452 SSF48452, 1 hit
SSF57667 SSF57667, 1 hit
SSF90229 SSF90229, 2 hits
PROSITEiView protein in PROSITE
PS50005 TPR, 2 hits
PS50293 TPR_REGION, 1 hit
PS50103 ZF_C3H1, 4 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

F8VPP8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MERQKRKADI EKGLQFIQST LPLKQEEYEA FLLKLVQNLF AEGNDLFREK
60 70 80 90 100
DYKQALVQYM EGLNVADYAA SDQVALPREL LCKLHVNRAA CYFTMGLYEK
110 120 130 140 150
ALEDSEKALG LDGESIRALF RKARALNELG RHKEAYECSS RCSLALPHDE
160 170 180 190 200
NVTQLGQELA QKLGLRVRKA YKRPQELETF SLLSNGAPAG LTDQGTSNGL
210 220 230 240 250
GSIDDIETDC YVDLRGSPAL LPSTPTMPLF PHVLDLLAPL DGSSRTLPGT
260 270 280 290 300
EGLDDFSDGD VFGPELDTLL DSLSLVQGGL PGSGMPSELP QLIPVFPGGT
310 320 330 340 350
PLLPPVVGGS IPVSSPLPPA SFGLVMDPSR KLAASVLDAL DSPGPTLDPL
360 370 380 390 400
DLLPYSEARL GALDSFGSAR GSLDKPDSFL EETSSQDHRP PSSTQKPAPS
410 420 430 440 450
PEPSMPNTTL LIKNPLAATH EFKQACQLCY PKTGPRAGDY TYREGLEHKC
460 470 480 490 500
RRDVLLGRLR SSENQIWKRI RPRPTKTSFV GSYYLCKDMI NKQDCKYGDN
510 520 530 540 550
CTFAYHQEEI DVWTEERKGT LNRDLLFDPL GGVKRGSLTI AKLLKEHQGI
560 570 580 590 600
FTFLCEICFD SKPRIISKGT KDSPSVCSNL AAKHSFYNNK CLVHIVRSTS
610 620 630 640 650
LKYSKIRQFQ EHFQFDVCRH EVRYGCLRED SCHFAHSFIE LKVWLLQQYS
660 670 680 690 700
GMTHEDIVQE SKKYWQQMEA HAGKASSGLG APRTHGPSTF DLQMKFVCGQ
710 720 730 740 750
CWRNGQVVEP DKDLKYCSAK ARHCWTKERR VLLVMSKAKR KWVSVRPLPS
760 770 780 790 800
IRNFPQQYDL CIHAQNGRKC QYVGNCSFAH SPEERDMWTF MKENKILDMQ
810 820 830 840 850
QTYDMWLKKH NPGKPGEGTP ISSREGEKQI QMPTDYADIM MGYHCWLCGK
860 870 880 890 900
NSNSKKQWQQ HIQSEKHKEK VFTSDSDASG WAYRFPMGEF RLCDRLQKGK
910 920 930 940 950
ACPDGDKCRC AHGQEELNEW LDRREVLKQK LAKARKDMLL CPRDDDFGKY
960 970 980
NFLLQEDGDT TGATPDAPVA ATATAATTTT GE
Length:982
Mass (Da):110,292
Last modified:September 21, 2011 - v1
Checksum:i2AC62EE9723179E7
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2R8VHI0A0A2R8VHI0_MOUSE
Zinc finger CCCH type-containing 7B
Zc3h7b
151Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC158970 Genomic DNA No translation available.
RefSeqiNP_001074485.1, NM_001081016.1
XP_017172009.1, XM_017316520.1
UniGeneiMm.432075

Genome annotation databases

EnsembliENSMUST00000109554; ENSMUSP00000105181; ENSMUSG00000022390
GeneIDi20286
KEGGimmu:20286
UCSCiuc007wxe.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC158970 Genomic DNA No translation available.
RefSeqiNP_001074485.1, NM_001081016.1
XP_017172009.1, XM_017316520.1
UniGeneiMm.432075

3D structure databases

ProteinModelPortaliF8VPP8
SMRiF8VPP8
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000105181

Proteomic databases

MaxQBiF8VPP8
PaxDbiF8VPP8
PeptideAtlasiF8VPP8
PRIDEiF8VPP8

Protocols and materials databases

DNASUi20286
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000109554; ENSMUSP00000105181; ENSMUSG00000022390
GeneIDi20286
KEGGimmu:20286
UCSCiuc007wxe.1 mouse

Organism-specific databases

CTDi23264
MGIiMGI:1328310 Zc3h7b

Phylogenomic databases

eggNOGiENOG410IN1T Eukaryota
ENOG410YBKB LUCA
GeneTreeiENSGT00390000018542
InParanoidiF8VPP8
OMAiACYSRIG
OrthoDBiEOG091G02K0
TreeFamiTF329017

Miscellaneous databases

ChiTaRSiZc3h7b mouse
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000022390 Expressed in 242 organ(s), highest expression level in brain
GenevisibleiF8VPP8 MM

Family and domain databases

Gene3Di1.25.40.10, 1 hit
InterProiView protein in InterPro
IPR013026 TPR-contain_dom
IPR011990 TPR-like_helical_dom_sf
IPR019734 TPR_repeat
IPR039691 ZC3H7A/B
IPR036236 Znf_C2H2_sf
IPR000571 Znf_CCCH
IPR036855 Znf_CCCH_sf
PANTHERiPTHR14928 PTHR14928, 1 hit
PfamiView protein in Pfam
PF00642 zf-CCCH, 2 hits
SMARTiView protein in SMART
SM00028 TPR, 2 hits
SM00356 ZnF_C3H1, 4 hits
SUPFAMiSSF48452 SSF48452, 1 hit
SSF57667 SSF57667, 1 hit
SSF90229 SSF90229, 2 hits
PROSITEiView protein in PROSITE
PS50005 TPR, 2 hits
PS50293 TPR_REGION, 1 hit
PS50103 ZF_C3H1, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiF8VPP8_MOUSE
AccessioniPrimary (citable) accession number: F8VPP8
Entry historyiIntegrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: November 7, 2018
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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