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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

PPS_4150

Organism
Pseudomonas putida (strain S16)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciPPUT1042876:PPS_RS21480-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
ORF Names:PPS_4150Imported
OrganismiPseudomonas putida (strain S16)Imported
Taxonomic identifieri1042876 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000000502 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi1042876.PPS_4150

Structurei

3D structure databases

ProteinModelPortaliF8G205
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini321 – 453DNA_LIGASE_A3InterPro annotationAdd BLAST133

Phylogenomic databases

eggNOGiENOG4107QIM Bacteria
COG1793 LUCA
KOiK10747

Family and domain databases

InterProiView protein in InterPro
IPR026333 ATP_dep_DNA_lig_pp_1105_fam
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR012308 DNA_ligase_ATP-dep_N
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR04120 DNA_lig_bact, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

F8G205-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKAFAELYLR LDATTSSTAK LTALREYFST APAGDAAWAV YFLAGGRPRQ
60 70 80 90 100
LVPTRVLREL AGRLAGLPDW LFEECYQAVG DLAETISLLV PESHHPGGDG
110 120 130 140 150
LARWVEAHLL PLRGLPVEEI QQRLPPLWAQ LDRPSLMLCL KLITGSFRVG
160 170 180 190 200
VSKLLVTRAL AQLAGLDAKR VAQRLVGYTD ISHRPTAASY QRLIAPESDD
210 220 230 240 250
EHSLRGGQPY PFFLAHPLQV STEQLDTLLG PPSEWQIEWK WDGIRNQVVK
260 270 280 290 300
REGQLWVWSR GEELVTERFP ELHSLAQTLP DGVVLDGEIL VWKPGGSAAE
310 320 330 340 350
LAVQPFALLQ QRLGRKTLGK KLLSDAPVVL QAYDLLEWQG EDWRSRPQHA
360 370 380 390 400
RRQQLEQVLE QHPLAPVLLS PLLEGQDWTD LARQREQSRS LGVEGLMLKQ
410 420 430 440 450
REALYGVGRT KDMGTWWKWK IDPFSVDAVL IYAQRGHGRR ASLYSDYTFA
460 470 480 490 500
VWDAPAGTPG RALVPFAKAY SGLSDEEMRK VDAIIRKTTV ETFGPVRSVT
510 520 530 540 550
PTLVFELGFE GIALSRRHKS GIAVRFPRML RWRLDKPVEE ADDLATLQAL

LA
Length:552
Mass (Da):61,903
Last modified:September 21, 2011 - v1
Checksum:i28B08D0529AFADF5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002870 Genomic DNA Translation: AEJ14689.1
RefSeqiWP_013973943.1, NC_015733.1

Genome annotation databases

EnsemblBacteriaiAEJ14689; AEJ14689; PPS_4150
KEGGippt:PPS_4150

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002870 Genomic DNA Translation: AEJ14689.1
RefSeqiWP_013973943.1, NC_015733.1

3D structure databases

ProteinModelPortaliF8G205
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi1042876.PPS_4150

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEJ14689; AEJ14689; PPS_4150
KEGGippt:PPS_4150

Phylogenomic databases

eggNOGiENOG4107QIM Bacteria
COG1793 LUCA
KOiK10747

Enzyme and pathway databases

BioCyciPPUT1042876:PPS_RS21480-MONOMER

Family and domain databases

InterProiView protein in InterPro
IPR026333 ATP_dep_DNA_lig_pp_1105_fam
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR012308 DNA_ligase_ATP-dep_N
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR04120 DNA_lig_bact, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF8G205_PSEP6
AccessioniPrimary (citable) accession number: F8G205
Entry historyiIntegrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: June 20, 2018
This is version 32 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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