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Protein
Submitted name:

Tungsten-containing aldehyde ferredoxin oxidoreductase

Gene

PYCH_09430

Organism
Pyrococcus yayanosii (strain CH1 / JCM 16557)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

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BioCyci
PYAY529709:G1GYE-941-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Tungsten-containing aldehyde ferredoxin oxidoreductaseImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:PYCH_09430Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPyrococcus yayanosii (strain CH1 / JCM 16557)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri529709 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000008386 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

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STRINGi
529709.PYCH_09430

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini4 – 207AFOR_NInterPro annotationAdd BLAST204

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

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eggNOGi
arCOG00706 Archaea
COG2414 LUCA

KEGG Orthology (KO)

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KOi
K03738

Identification of Orthologs from Complete Genome Data

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OMAi
YFMGVKK

Database of Orthologous Groups

More...
OrthoDBi
POG093Z03Y8

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

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Gene3Di
1.10.569.10, 1 hit
1.10.599.10, 1 hit
3.60.9.10, 1 hit

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR013984 Ald_Fedxn_OxRdtase_dom2
IPR013985 Ald_Fedxn_OxRdtase_dom3
IPR013983 Ald_Fedxn_OxRdtase_N
IPR036503 Ald_Fedxn_OxRdtase_N_sf
IPR001203 OxRdtase_Ald_Fedxn_C
IPR036021 Tungsten_al_ferr_oxy-like_C

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01314 AFOR_C, 1 hit
PF02730 AFOR_N, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

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SMARTi
View protein in SMART
SM00790 AFOR_N, 1 hit

Superfamily database of structural and functional annotation

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SUPFAMi
SSF48310 SSF48310, 1 hit
SSF56228 SSF56228, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

F8AEB6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MFGYNGKILR VNLSDETIKE ETFNEAFAKR WLGTRGFGIY YLLKEIDPTI
60 70 80 90 100
DPFSPENKLI FATGPLTGTS APTGGRYMVI TKSPLTEYVA MANSGGFFGP
110 120 130 140 150
ELKFAGWDAL IIEGKANHPV YIYINDESVE IKDASHLWGK VVSETEERLK
160 170 180 190 200
EEVGDKNVQI ASIGPAGENK VRFAAVMNNG HRAAGRGGVG AVMGSKNLKA
210 220 230 240 250
IVVRGHKKVE VADKGKFMEV VREKIEKLKK DPVAGGGLPK YGTAVLVNII
260 270 280 290 300
NENGLYPTRN FQKGVFEYAY EQSGEAMAAK YLTKNKPCFA CPIGCGRVNR
310 320 330 340 350
LPTLGITEGP EYESVWALGA NLGINDLASI IEANHLADEF GMDTISLGGT
360 370 380 390 400
LATAMELYEK GLLKQEDIGE DAPPFRWGNT EVLHYYVEKI ARREGFGDVL
410 420 430 440 450
AEGGYRLAEK FNGLEYFMGV KKQELPAYDP RGAEGHGLGY ATNNRGGCHI
460 470 480 490 500
KQYMISPEIL GYPYKMDPHD ISDEKVKMVI LFQDLTALVD AAGLCVFTTF
510 520 530 540 550
GLGADDYRDL LNAALGWDFS TEDYLKIGER IWNAERLFNL KAGLDPVKED
560 570 580 590 600
TLPKRLLEEP MPEGPHKGHV VRLKEMLPRY YKFRGWTEDG RIPEEKLKEL

GLEEFI
Length:606
Mass (Da):67,230
Last modified:September 21, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iA0E6F56C66237039
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
CP002779 Genomic DNA Translation: AEH24628.1

NCBI Reference Sequences

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RefSeqi
WP_013905685.1, NC_015680.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
AEH24628; AEH24628; PYCH_09430

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
10837518

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
pya:PYCH_09430

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002779 Genomic DNA Translation: AEH24628.1
RefSeqiWP_013905685.1, NC_015680.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

Protein-protein interaction databases

STRINGi529709.PYCH_09430

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEH24628; AEH24628; PYCH_09430
GeneIDi10837518
KEGGipya:PYCH_09430

Phylogenomic databases

eggNOGiarCOG00706 Archaea
COG2414 LUCA
KOiK03738
OMAiYFMGVKK
OrthoDBiPOG093Z03Y8

Enzyme and pathway databases

BioCyciPYAY529709:G1GYE-941-MONOMER

Family and domain databases

Gene3Di1.10.569.10, 1 hit
1.10.599.10, 1 hit
3.60.9.10, 1 hit
InterProiView protein in InterPro
IPR013984 Ald_Fedxn_OxRdtase_dom2
IPR013985 Ald_Fedxn_OxRdtase_dom3
IPR013983 Ald_Fedxn_OxRdtase_N
IPR036503 Ald_Fedxn_OxRdtase_N_sf
IPR001203 OxRdtase_Ald_Fedxn_C
IPR036021 Tungsten_al_ferr_oxy-like_C
PfamiView protein in Pfam
PF01314 AFOR_C, 1 hit
PF02730 AFOR_N, 1 hit
SMARTiView protein in SMART
SM00790 AFOR_N, 1 hit
SUPFAMiSSF48310 SSF48310, 1 hit
SSF56228 SSF56228, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiF8AEB6_PYRYC
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: F8AEB6
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: December 5, 2018
This is version 36 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Complete proteome, Reference proteomeImported
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