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Protein
Submitted name:

G/T mismatch-specific thymine DNA glycosylase

Gene

TDG

Organism
Callithrix jacchus (White-tufted-ear marmoset)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
G/T mismatch-specific thymine DNA glycosylaseImported
Submitted name:
Thymine DNA glycosylaseImported
Gene namesi
Name:TDGImported
OrganismiCallithrix jacchus (White-tufted-ear marmoset)Imported
Taxonomic identifieri9483 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeCallitrichinaeCallithrixCallithrix
Proteomesi
  • UP000008225 Componenti: Unplaced

Interactioni

Protein-protein interaction databases

STRINGi9483.ENSCJAP00000026748

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini131 – 280UDGInterPro annotationAdd BLAST150

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili292 – 312Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG4120 Eukaryota
COG3663 LUCA
GeneTreeiENSGT00390000000987
KOiK20813
OrthoDBiEOG091G0N58
TreeFamiTF328764

Family and domain databases

CDDicd10028 UDG_F2_MUG, 1 hit
Gene3Di3.40.470.10, 1 hit
InterProiView protein in InterPro
IPR015637 MUG/TDG
IPR003310 TDG
IPR005122 Uracil-DNA_glycosylase-like
IPR036895 Uracil-DNA_glycosylase-like_sf
PANTHERiPTHR12159 PTHR12159, 1 hit
PfamiView protein in Pfam
PF03167 UDG, 1 hit
SUPFAMiSSF52141 SSF52141, 1 hit
TIGRFAMsiTIGR00584 mug, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

F7IIJ2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEAENAGSYC LQQAQAFYTF PFQQMMAEAP NMAVVNEQQM PEEVPAPAPA
60 70 80 90 100
QEPVQEPPKG RKRKPRTTEP KKPAEPKKPA ESKKSGKSTK SKEKQEKITD
110 120 130 140 150
TYKVKRKVDR FNGVSEAELL TKTLPDILTF NLDIVIIGIN PGLMAAYKGH
160 170 180 190 200
HYPGPGNHFW KCLFMSGLSE VQLNHMDDHT LPGKYGIGFT NMVERTTPGS
210 220 230 240 250
KDLSSKEFRE GGRILVQKLQ KYQPRIAVFN GKCIYEIFSK EVFGVKVKNL
260 270 280 290 300
EFGLQPHKIP DTETLCYVMP SSSARCAQFP RAQDKVHYYI KLKDLRDQLK
310 320 330 340 350
GIERNMDVQE VQYTFDLQLA QEDAKKMAVK EEKYDPGYEA AYGGAYVENP
360 370 380 390 400
CNTEPCGFSS NGLVDSLELQ GESAFSGIPN GQWMTQSFTD QIPSFNNHCG
410
TQEQEEENHA
Length:410
Mass (Da):46,198
Last modified:June 20, 2018 - v2
Checksum:i5432B27B4884F2C8
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F7IN90F7IN90_CALJA
Uncharacterized protein
TDG
410Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GAMT01005665 mRNA Translation: JAB06196.1
GAMS01006466 mRNA Translation: JAB16670.1
GAMR01008510 mRNA Translation: JAB25422.1
GAMQ01001848 mRNA Translation: JAB40003.1
GAMP01008019 mRNA Translation: JAB44736.1
RefSeqiXP_002752967.1, XM_002752921.2

Genome annotation databases

EnsembliENSCJAT00000028277; ENSCJAP00000026754; ENSCJAG00000014510
GeneIDi100398863
KEGGicjc:100398863

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GAMT01005665 mRNA Translation: JAB06196.1
GAMS01006466 mRNA Translation: JAB16670.1
GAMR01008510 mRNA Translation: JAB25422.1
GAMQ01001848 mRNA Translation: JAB40003.1
GAMP01008019 mRNA Translation: JAB44736.1
RefSeqiXP_002752967.1, XM_002752921.2

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9483.ENSCJAP00000026748

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSCJAT00000028277; ENSCJAP00000026754; ENSCJAG00000014510
GeneIDi100398863
KEGGicjc:100398863

Organism-specific databases

CTDi6996

Phylogenomic databases

eggNOGiKOG4120 Eukaryota
COG3663 LUCA
GeneTreeiENSGT00390000000987
KOiK20813
OrthoDBiEOG091G0N58
TreeFamiTF328764

Family and domain databases

CDDicd10028 UDG_F2_MUG, 1 hit
Gene3Di3.40.470.10, 1 hit
InterProiView protein in InterPro
IPR015637 MUG/TDG
IPR003310 TDG
IPR005122 Uracil-DNA_glycosylase-like
IPR036895 Uracil-DNA_glycosylase-like_sf
PANTHERiPTHR12159 PTHR12159, 1 hit
PfamiView protein in Pfam
PF03167 UDG, 1 hit
SUPFAMiSSF52141 SSF52141, 1 hit
TIGRFAMsiTIGR00584 mug, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF7IIJ2_CALJA
AccessioniPrimary (citable) accession number: F7IIJ2
Secondary accession number(s): F7IIM0
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: June 20, 2018
Last modified: November 7, 2018
This is version 42 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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